Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 CICP8-201ENST00000455800 2813 ntBASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 AC006538.3-201ENST00000612495 578 ntBASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 AC093512.1-201ENST00000617969 520 ntBASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LSMEM1Q8N8F7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 AC007787.1-201ENST00000588095 1583 ntBASIC14□□□□□ -0.17
LSMEM1Q8N8F7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 AL589987.1-201ENST00000453380 819 ntBASIC14□□□□□ -0.17
LSMEM1Q8N8F7 AL512638.1-201ENST00000457493 794 ntBASIC14□□□□□ -0.17
LSMEM1Q8N8F7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 AC036164.1-201ENST00000570544 333 ntBASIC14□□□□□ -0.17
LSMEM1Q8N8F7 AL390955.2-201ENST00000603032 514 ntBASIC14□□□□□ -0.17
LSMEM1Q8N8F7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 SLC9A7P1-202ENST00000556476 2239 ntBASIC14□□□□□ -0.17
LSMEM1Q8N8F7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14□□□□□ -0.17
LSMEM1Q8N8F7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14□□□□□ -0.17
LSMEM1Q8N8F7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms