Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 NORAD-201ENST00000565493 5339 ntBASIC16.94■□□□□ 0.3
TRIM50Q86XT4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 CLUHP2-201ENST00000426660 1303 ntBASIC16.94■□□□□ 0.3
TRIM50Q86XT4 AL360270.3-201ENST00000609118 1348 ntBASIC16.94■□□□□ 0.3
TRIM50Q86XT4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.93■□□□□ 0.3
TRIM50Q86XT4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.93■□□□□ 0.3
TRIM50Q86XT4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 AC106820.3-201ENST00000561653 397 ntBASIC16.93■□□□□ 0.3
TRIM50Q86XT4 DUX4L47-201ENST00000566374 394 ntBASIC16.93■□□□□ 0.3
TRIM50Q86XT4 AC103810.3-201ENST00000583567 96 ntBASIC16.93■□□□□ 0.3
TRIM50Q86XT4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM50Q86XT4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 GHSR-202ENST00000427970 912 ntBASIC16.92■□□□□ 0.3
TRIM50Q86XT4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 HSPB1P2-201ENST00000448722 546 ntBASIC16.92■□□□□ 0.3
TRIM50Q86XT4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 RN7SL713P-201ENST00000582127 302 ntBASIC16.92■□□□□ 0.3
TRIM50Q86XT4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 AL137783.1-201ENST00000623494 1896 ntBASIC16.92■□□□□ 0.3
TRIM50Q86XT4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM50Q86XT4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM50Q86XT4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms