Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 AC241585.1-201ENST00000433527 519 ntBASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 CYMP-203ENST00000474680 1263 ntBASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 AC106028.4-201ENST00000614509 607 ntBASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 AC015656.1-201ENST00000624209 3578 ntBASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 AC100757.3-201ENST00000622361 1406 ntBASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATPAF1Q5TC12 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 AZGP1P1-201ENST00000411909 902 ntBASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 AC136604.1-201ENST00000418535 575 ntBASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 FAM8A3P-201ENST00000427218 844 ntBASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms