Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 FKBP4P6-201ENST00000457486 1332 ntBASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 AC004945.1-201ENST00000416738 983 ntBASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 BX284668.4-201ENST00000453917 508 ntBASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 AC126915.1-201ENST00000522847 1038 ntBASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 AC006518.1-201ENST00000541449 943 ntBASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 AC060766.1-201ENST00000590824 627 ntBASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 AC084346.2-201ENST00000607097 949 ntBASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 AC007663.3-201ENST00000609632 465 ntBASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 AC138028.6-201ENST00000616106 1482 ntBASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.65□□□□□ -0.22
RNFT1Q5M7Z0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
RNFT1Q5M7Z0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 AL596257.1-201ENST00000641463 2694 ntBASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 NKAIN1P1-201ENST00000435754 582 ntBASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 SCARNA20.5-201ENST00000516991 142 ntBASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 OR13I1P-201ENST00000609811 1264 ntBASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 AL021578.1-201ENST00000613646 709 ntBASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms