Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.67■□□□□ 0.1
ERCC2P18074 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.67■□□□□ 0.1
ERCC2P18074 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.67■□□□□ 0.1
ERCC2P18074 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.67■□□□□ 0.1
ERCC2P18074 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ERCC2P18074 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.67■□□□□ 0.1
ERCC2P18074 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
ERCC2P18074 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.66■□□□□ 0.1
ERCC2P18074 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ERCC2P18074 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ERCC2P18074 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ERCC2P18074 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ERCC2P18074 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ERCC2P18074 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ERCC2P18074 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ERCC2P18074 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.66■□□□□ 0.1
ERCC2P18074 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ERCC2P18074 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.66■□□□□ 0.1
ERCC2P18074 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ERCC2P18074 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ERCC2P18074 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.66■□□□□ 0.1
ERCC2P18074 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.66■□□□□ 0.1
ERCC2P18074 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.66■□□□□ 0.1
ERCC2P18074 RN7SL752P-201ENST00000463779 287 ntBASIC15.66■□□□□ 0.1
ERCC2P18074 RN7SL692P-201ENST00000464677 288 ntBASIC15.66■□□□□ 0.1
ERCC2P18074 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ERCC2P18074 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ERCC2P18074 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.66■□□□□ 0.1
ERCC2P18074 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ERCC2P18074 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.66■□□□□ 0.1
ERCC2P18074 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.66■□□□□ 0.1
ERCC2P18074 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.66■□□□□ 0.1
ERCC2P18074 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.66■□□□□ 0.1
ERCC2P18074 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.66■□□□□ 0.1
ERCC2P18074 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.66■□□□□ 0.1
ERCC2P18074 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ERCC2P18074 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
ERCC2P18074 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.66■□□□□ 0.1
ERCC2P18074 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ERCC2P18074 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ERCC2P18074 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ERCC2P18074 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.66■□□□□ 0.1
ERCC2P18074 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ERCC2P18074 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ERCC2P18074 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.66■□□□□ 0.1
ERCC2P18074 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ERCC2P18074 MSTO2P-201ENST00000314835 1709 ntBASIC15.65■□□□□ 0.1
ERCC2P18074 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.65■□□□□ 0.1
ERCC2P18074 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.65■□□□□ 0.1
ERCC2P18074 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ERCC2P18074 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ERCC2P18074 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ERCC2P18074 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ERCC2P18074 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ERCC2P18074 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.65■□□□□ 0.1
ERCC2P18074 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ERCC2P18074 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
ERCC2P18074 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ERCC2P18074 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
ERCC2P18074 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ERCC2P18074 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
ERCC2P18074 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ERCC2P18074 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ERCC2P18074 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
ERCC2P18074 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.65■□□□□ 0.1
ERCC2P18074 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.65■□□□□ 0.1
ERCC2P18074 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ERCC2P18074 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.65■□□□□ 0.1
ERCC2P18074 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ERCC2P18074 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.65■□□□□ 0.1
ERCC2P18074 ACTG1P3-201ENST00000431775 1114 ntBASIC15.65■□□□□ 0.1
ERCC2P18074 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ERCC2P18074 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ERCC2P18074 AC022137.2-201ENST00000503482 481 ntBASIC15.65■□□□□ 0.1
ERCC2P18074 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.65■□□□□ 0.1
ERCC2P18074 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.65■□□□□ 0.1
ERCC2P18074 AL596325.1-201ENST00000563991 1082 ntBASIC15.65■□□□□ 0.1
ERCC2P18074 DUX4L47-201ENST00000566374 394 ntBASIC15.65■□□□□ 0.1
ERCC2P18074 AC009486.1-201ENST00000569860 813 ntBASIC15.65■□□□□ 0.1
ERCC2P18074 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.65■□□□□ 0.1
ERCC2P18074 AC010319.3-201ENST00000597028 470 ntBASIC15.65■□□□□ 0.1
ERCC2P18074 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ERCC2P18074 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ERCC2P18074 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ERCC2P18074 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ERCC2P18074 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ERCC2P18074 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ERCC2P18074 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.65■□□□□ 0.1
ERCC2P18074 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ERCC2P18074 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms