Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2A2P16615 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP2A2P16615 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP2A2P16615 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2A2P16615 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2A2P16615 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 MIR4722-201ENST00000578292 60 ntBASIC16.9■□□□□ 0.3
ATP2A2P16615 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP2A2P16615 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2A2P16615 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 AP001282.1-201ENST00000531301 1499 ntBASIC16.9■□□□□ 0.3
ATP2A2P16615 KRT8P19-201ENST00000551916 1455 ntBASIC16.9■□□□□ 0.3
ATP2A2P16615 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 KRT8P35-201ENST00000483942 1338 ntBASIC16.9■□□□□ 0.3
ATP2A2P16615 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2A2P16615 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
ATP2A2P16615 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
ATP2A2P16615 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ATP2A2P16615 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A2P16615 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP2A2P16615 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
ATP2A2P16615 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
ATP2A2P16615 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A2P16615 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A2P16615 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A2P16615 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A2P16615 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A2P16615 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A2P16615 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ATP2A2P16615 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ATP2A2P16615 CD8B2-202ENST00000417670 633 ntBASIC16.89■□□□□ 0.29
ATP2A2P16615 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.89■□□□□ 0.29
ATP2A2P16615 MIR3619-201ENST00000579667 83 ntBASIC16.89■□□□□ 0.29
ATP2A2P16615 MIR4706-201ENST00000582134 82 ntBASIC16.89■□□□□ 0.29
ATP2A2P16615 NDUFV2P1-201ENST00000596415 907 ntBASIC16.89■□□□□ 0.29
ATP2A2P16615 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A2P16615 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.89■□□□□ 0.29
ATP2A2P16615 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A2P16615 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A2P16615 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A2P16615 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A2P16615 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A2P16615 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.89■□□□□ 0.29
ATP2A2P16615 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A2P16615 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A2P16615 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A2P16615 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A2P16615 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.89■□□□□ 0.29
ATP2A2P16615 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A2P16615 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A2P16615 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A2P16615 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.89■□□□□ 0.29
ATP2A2P16615 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP2A2P16615 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A2P16615 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A2P16615 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.88■□□□□ 0.29
ATP2A2P16615 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP2A2P16615 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A2P16615 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A2P16615 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP2A2P16615 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A2P16615 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A2P16615 AC134407.2-201ENST00000625089 1978 ntBASIC16.88■□□□□ 0.29
ATP2A2P16615 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A2P16615 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A2P16615 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP2A2P16615 AC018735.1-201ENST00000437208 1502 ntBASIC16.88■□□□□ 0.29
ATP2A2P16615 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A2P16615 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A2P16615 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A2P16615 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
ATP2A2P16615 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP2A2P16615 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A2P16615 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A2P16615 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP2A2P16615 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP2A2P16615 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.88■□□□□ 0.29
ATP2A2P16615 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.88■□□□□ 0.29
ATP2A2P16615 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ATP2A2P16615 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ATP2A2P16615 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP2A2P16615 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP2A2P16615 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.88■□□□□ 0.29
ATP2A2P16615 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms