Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH1P12830 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH1P12830 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH1P12830 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDH1P12830 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDH1P12830 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH1P12830 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.9□□□□□ -0.02
CDH1P12830 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.9□□□□□ -0.02
CDH1P12830 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH1P12830 VDAC1P7-201ENST00000462417 847 ntBASIC14.9□□□□□ -0.02
CDH1P12830 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH1P12830 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.9□□□□□ -0.02
CDH1P12830 AC104596.2-201ENST00000512793 793 ntBASIC14.9□□□□□ -0.02
CDH1P12830 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.9□□□□□ -0.02
CDH1P12830 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.9□□□□□ -0.02
CDH1P12830 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH1P12830 AC123567.1-201ENST00000548294 1261 ntBASIC14.9□□□□□ -0.02
CDH1P12830 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH1P12830 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH1P12830 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH1P12830 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH1P12830 AC092364.2-202ENST00000597012 1073 ntBASIC14.9□□□□□ -0.02
CDH1P12830 CHCHD2P3-201ENST00000603038 451 ntBASIC14.9□□□□□ -0.02
CDH1P12830 AC093726.1-201ENST00000608064 963 ntBASIC14.9□□□□□ -0.02
CDH1P12830 AL662799.1-202ENST00000614205 422 ntBASIC14.9□□□□□ -0.02
CDH1P12830 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH1P12830 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDH1P12830 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH1P12830 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 ZBED1P1-201ENST00000502364 1930 ntBASIC14.9□□□□□ -0.02
CDH1P12830 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH1P12830 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.89□□□□□ -0.03
CDH1P12830 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH1P12830 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDH1P12830 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CDH1P12830 AL391825.1-201ENST00000457671 1364 ntBASIC14.89□□□□□ -0.03
CDH1P12830 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.89□□□□□ -0.03
CDH1P12830 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH1P12830 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH1P12830 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CDH1P12830 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CDH1P12830 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CDH1P12830 AC087499.6-201ENST00000411576 835 ntBASIC14.89□□□□□ -0.03
CDH1P12830 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH1P12830 AC098850.1-201ENST00000419919 790 ntBASIC14.89□□□□□ -0.03
CDH1P12830 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 API5-211ENST00000534695 560 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH1P12830 AC190387.1-201ENST00000551683 408 ntBASIC14.89□□□□□ -0.03
CDH1P12830 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
CDH1P12830 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.89□□□□□ -0.03
CDH1P12830 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH1P12830 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH1P12830 AC007431.3-201ENST00000623221 587 ntBASIC14.89□□□□□ -0.03
CDH1P12830 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH1P12830 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
CDH1P12830 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CDH1P12830 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH1P12830 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH1P12830 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH1P12830 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CDH1P12830 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH1P12830 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms