Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM2P07951 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TPM2P07951 ZBED1P1-201ENST00000502364 1930 ntBASIC17.45■□□□□ 0.38
TPM2P07951 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC17.45■□□□□ 0.38
TPM2P07951 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM2P07951 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.44■□□□□ 0.38
TPM2P07951 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TPM2P07951 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM2P07951 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM2P07951 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM2P07951 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM2P07951 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.44■□□□□ 0.38
TPM2P07951 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC17.44■□□□□ 0.38
TPM2P07951 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM2P07951 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM2P07951 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM2P07951 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM2P07951 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM2P07951 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM2P07951 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM2P07951 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM2P07951 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM2P07951 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM2P07951 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM2P07951 AL645939.2-201ENST00000427340 991 ntBASIC17.44■□□□□ 0.38
TPM2P07951 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.44■□□□□ 0.38
TPM2P07951 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM2P07951 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM2P07951 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM2P07951 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.44■□□□□ 0.38
TPM2P07951 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM2P07951 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.44■□□□□ 0.38
TPM2P07951 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.44■□□□□ 0.38
TPM2P07951 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.44■□□□□ 0.38
TPM2P07951 AC140113.2-201ENST00000604370 208 ntBASIC17.44■□□□□ 0.38
TPM2P07951 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.44■□□□□ 0.38
TPM2P07951 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TPM2P07951 AC131902.2-201ENST00000566892 2172 ntBASIC17.44■□□□□ 0.38
TPM2P07951 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM2P07951 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM2P07951 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM2P07951 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
TPM2P07951 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TPM2P07951 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM2P07951 AC127383.1-201ENST00000444697 1800 ntBASIC17.44■□□□□ 0.38
TPM2P07951 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM2P07951 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TPM2P07951 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM2P07951 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 FOXO1B-201ENST00000504678 1527 ntBASIC17.43■□□□□ 0.38
TPM2P07951 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 AC142381.1-201ENST00000426099 345 ntBASIC17.43■□□□□ 0.38
TPM2P07951 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.43■□□□□ 0.38
TPM2P07951 FAM58CP-201ENST00000435741 640 ntBASIC17.43■□□□□ 0.38
TPM2P07951 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.43■□□□□ 0.38
TPM2P07951 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.43■□□□□ 0.38
TPM2P07951 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.43■□□□□ 0.38
TPM2P07951 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.43■□□□□ 0.38
TPM2P07951 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.43■□□□□ 0.38
TPM2P07951 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.43■□□□□ 0.38
TPM2P07951 MIR4313-201ENST00000580760 101 ntBASIC17.43■□□□□ 0.38
TPM2P07951 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 KRT8P37-201ENST00000451609 1420 ntBASIC17.43■□□□□ 0.38
TPM2P07951 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.43■□□□□ 0.38
TPM2P07951 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.43■□□□□ 0.38
TPM2P07951 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.43■□□□□ 0.38
TPM2P07951 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TPM2P07951 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
TPM2P07951 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.43■□□□□ 0.38
TPM2P07951 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM2P07951 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TPM2P07951 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC17.42■□□□□ 0.38
TPM2P07951 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM2P07951 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM2P07951 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TPM2P07951 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM2P07951 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.42■□□□□ 0.38
TPM2P07951 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM2P07951 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM2P07951 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM2P07951 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.42■□□□□ 0.38
TPM2P07951 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.42■□□□□ 0.38
TPM2P07951 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.42■□□□□ 0.38
TPM2P07951 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms