Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.42■□□□□ 0.06
HLA-DQB2P05538 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 INE1-201ENST00000456273 945 ntBASIC15.42■□□□□ 0.06
HLA-DQB2P05538 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 AC022616.1-201ENST00000518688 554 ntBASIC15.42■□□□□ 0.06
HLA-DQB2P05538 TDH-203ENST00000531764 1110 ntBASIC15.42■□□□□ 0.06
HLA-DQB2P05538 AC009486.1-201ENST00000569860 813 ntBASIC15.42■□□□□ 0.06
HLA-DQB2P05538 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 AC023090.2-201ENST00000625182 2110 ntBASIC15.42■□□□□ 0.06
HLA-DQB2P05538 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DQB2P05538 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 AC055811.4-201ENST00000624039 1754 ntBASIC15.41■□□□□ 0.06
HLA-DQB2P05538 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 ACTG1P3-201ENST00000431775 1114 ntBASIC15.41■□□□□ 0.06
HLA-DQB2P05538 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 KRT18P25-201ENST00000508931 1278 ntBASIC15.41■□□□□ 0.06
HLA-DQB2P05538 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 LRRC59-203ENST00000576448 1531 ntBASIC15.41■□□□□ 0.06
HLA-DQB2P05538 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DQB2P05538 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 AC018529.2-202ENST00000611482 3087 ntBASIC15.4■□□□□ 0.06
HLA-DQB2P05538 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 BAATP1-201ENST00000412284 1225 ntBASIC15.4■□□□□ 0.06
HLA-DQB2P05538 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms