Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.17■□□□□ 0.18
TIMP1P01033 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.17■□□□□ 0.18
TIMP1P01033 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TIMP1P01033 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TIMP1P01033 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TIMP1P01033 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TIMP1P01033 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TIMP1P01033 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.17■□□□□ 0.18
TIMP1P01033 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.17■□□□□ 0.18
TIMP1P01033 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TIMP1P01033 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TIMP1P01033 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TIMP1P01033 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TIMP1P01033 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.17■□□□□ 0.18
TIMP1P01033 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TIMP1P01033 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TIMP1P01033 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.16■□□□□ 0.18
TIMP1P01033 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.16■□□□□ 0.18
TIMP1P01033 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TIMP1P01033 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.16■□□□□ 0.18
TIMP1P01033 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TIMP1P01033 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.16■□□□□ 0.18
TIMP1P01033 TSPY25P-201ENST00000429463 745 ntBASIC16.16■□□□□ 0.18
TIMP1P01033 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.16■□□□□ 0.18
TIMP1P01033 AC092638.2-201ENST00000441105 947 ntBASIC16.16■□□□□ 0.18
TIMP1P01033 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TIMP1P01033 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 MRPL22P1-201ENST00000505398 616 ntBASIC16.16■□□□□ 0.18
TIMP1P01033 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 AC114947.1-202ENST00000514136 344 ntBASIC16.16■□□□□ 0.18
TIMP1P01033 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.16■□□□□ 0.18
TIMP1P01033 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.16■□□□□ 0.18
TIMP1P01033 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.16■□□□□ 0.18
TIMP1P01033 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TIMP1P01033 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.16■□□□□ 0.18
TIMP1P01033 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 AC009090.5-201ENST00000624886 2285 ntBASIC16.16■□□□□ 0.18
TIMP1P01033 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.16■□□□□ 0.18
TIMP1P01033 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.16■□□□□ 0.18
TIMP1P01033 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.16■□□□□ 0.18
TIMP1P01033 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMP1P01033 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.15■□□□□ 0.18
TIMP1P01033 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.15■□□□□ 0.18
TIMP1P01033 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.15■□□□□ 0.18
TIMP1P01033 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TIMP1P01033 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.15■□□□□ 0.18
TIMP1P01033 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.15■□□□□ 0.18
TIMP1P01033 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 ORAOV1P1-201ENST00000503108 395 ntBASIC16.15■□□□□ 0.18
TIMP1P01033 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.15■□□□□ 0.18
TIMP1P01033 LTB4R2-202ENST00000528054 3092 ntBASIC16.15■□□□□ 0.18
TIMP1P01033 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.15■□□□□ 0.18
TIMP1P01033 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.15■□□□□ 0.18
TIMP1P01033 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.15■□□□□ 0.18
TIMP1P01033 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC16.15■□□□□ 0.18
TIMP1P01033 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
TIMP1P01033 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.15■□□□□ 0.18
TIMP1P01033 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC16.15■□□□□ 0.18
TIMP1P01033 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.15■□□□□ 0.18
TIMP1P01033 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMP1P01033 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TIMP1P01033 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP1P01033 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
TIMP1P01033 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms