Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AP006294.1-201ENST00000415407 339 ntBASIC14.03□□□□□ -0.16
NKX2-2O95096 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.03□□□□□ -0.16
NKX2-2O95096 ACTG1P3-201ENST00000431775 1114 ntBASIC14.03□□□□□ -0.16
NKX2-2O95096 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.03□□□□□ -0.16
NKX2-2O95096 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.03□□□□□ -0.16
NKX2-2O95096 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NKX2-2O95096 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-2O95096 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.03□□□□□ -0.16
NKX2-2O95096 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.03□□□□□ -0.16
NKX2-2O95096 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.03□□□□□ -0.16
NKX2-2O95096 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.03□□□□□ -0.16
NKX2-2O95096 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.03□□□□□ -0.16
NKX2-2O95096 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-2O95096 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.03□□□□□ -0.16
NKX2-2O95096 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-2O95096 FAM45BP-202ENST00000592932 1624 ntBASIC14.03□□□□□ -0.16
NKX2-2O95096 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-2O95096 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-2O95096 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NKX2-2O95096 AC007292.2-201ENST00000593524 1812 ntBASIC14.03□□□□□ -0.16
NKX2-2O95096 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.03□□□□□ -0.16
NKX2-2O95096 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
NKX2-2O95096 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.03□□□□□ -0.16
NKX2-2O95096 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.03□□□□□ -0.16
NKX2-2O95096 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NKX2-2O95096 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.03□□□□□ -0.16
NKX2-2O95096 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-2O95096 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-2O95096 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.03□□□□□ -0.16
NKX2-2O95096 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.03□□□□□ -0.16
NKX2-2O95096 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-2O95096 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-2O95096 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NKX2-2O95096 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-2O95096 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-2O95096 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-2O95096 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.02□□□□□ -0.16
NKX2-2O95096 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-2O95096 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-2O95096 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-2O95096 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
NKX2-2O95096 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-2O95096 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-2O95096 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.02□□□□□ -0.16
NKX2-2O95096 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-2O95096 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
NKX2-2O95096 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.02□□□□□ -0.16
NKX2-2O95096 AC055811.4-201ENST00000624039 1754 ntBASIC14.02□□□□□ -0.16
NKX2-2O95096 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-2O95096 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
NKX2-2O95096 LRRC59-203ENST00000576448 1531 ntBASIC14.02□□□□□ -0.16
NKX2-2O95096 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-2O95096 AC018665.1-201ENST00000622927 1362 ntBASIC14.02□□□□□ -0.17
NKX2-2O95096 KRT8P35-201ENST00000483942 1338 ntBASIC14.02□□□□□ -0.17
NKX2-2O95096 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-2O95096 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.02□□□□□ -0.17
NKX2-2O95096 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-2O95096 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.02□□□□□ -0.17
NKX2-2O95096 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NKX2-2O95096 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NKX2-2O95096 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.02□□□□□ -0.17
NKX2-2O95096 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.02□□□□□ -0.17
NKX2-2O95096 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.02□□□□□ -0.17
NKX2-2O95096 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-2O95096 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.02□□□□□ -0.17
NKX2-2O95096 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.02□□□□□ -0.17
NKX2-2O95096 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.02□□□□□ -0.17
NKX2-2O95096 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.02□□□□□ -0.17
NKX2-2O95096 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
NKX2-2O95096 AC027307.3-201ENST00000594262 1100 ntBASIC14.02□□□□□ -0.17
NKX2-2O95096 RPSAP52-203ENST00000622976 1023 ntBASIC14.02□□□□□ -0.17
NKX2-2O95096 AC025048.6-201ENST00000634326 1161 ntBASIC14.02□□□□□ -0.17
NKX2-2O95096 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-2O95096 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NKX2-2O95096 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-2O95096 AC018529.2-202ENST00000611482 3087 ntBASIC14.02□□□□□ -0.17
NKX2-2O95096 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NKX2-2O95096 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.02□□□□□ -0.17
NKX2-2O95096 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.02□□□□□ -0.17
NKX2-2O95096 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NKX2-2O95096 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-2O95096 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-2O95096 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-2O95096 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-2O95096 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-2O95096 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.02□□□□□ -0.17
NKX2-2O95096 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-2O95096 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
NKX2-2O95096 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.01□□□□□ -0.17
NKX2-2O95096 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.01□□□□□ -0.17
NKX2-2O95096 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NKX2-2O95096 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.01□□□□□ -0.17
NKX2-2O95096 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms