Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 CLUHP2-201ENST00000426660 1303 ntBASIC15.22■□□□□ 0.03
MID1O15344 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MID1O15344 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MID1O15344 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MID1O15344 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.22■□□□□ 0.03
MID1O15344 REXO1L4P-201ENST00000605109 1937 ntBASIC15.22■□□□□ 0.03
MID1O15344 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
MID1O15344 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.22■□□□□ 0.03
MID1O15344 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.22■□□□□ 0.03
MID1O15344 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.22■□□□□ 0.03
MID1O15344 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.22■□□□□ 0.03
MID1O15344 KRT8P13-201ENST00000463294 1010 ntBASIC15.22■□□□□ 0.03
MID1O15344 AC026434.2-201ENST00000506094 1078 ntBASIC15.22■□□□□ 0.03
MID1O15344 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.22■□□□□ 0.03
MID1O15344 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.22■□□□□ 0.03
MID1O15344 AC106820.3-201ENST00000561653 397 ntBASIC15.22■□□□□ 0.03
MID1O15344 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.22■□□□□ 0.03
MID1O15344 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
MID1O15344 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.22■□□□□ 0.03
MID1O15344 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 NORAD-201ENST00000565493 5339 ntBASIC15.22■□□□□ 0.03
MID1O15344 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.22■□□□□ 0.03
MID1O15344 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MID1O15344 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MID1O15344 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.21■□□□□ 0.03
MID1O15344 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
MID1O15344 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.21■□□□□ 0.03
MID1O15344 KRT8P4-201ENST00000509735 1454 ntBASIC15.21■□□□□ 0.03
MID1O15344 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.21■□□□□ 0.03
MID1O15344 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
MID1O15344 AC103702.1-201ENST00000548801 2630 ntBASIC15.21■□□□□ 0.03
MID1O15344 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MID1O15344 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MID1O15344 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MID1O15344 AC087481.3-201ENST00000602886 1894 ntBASIC15.21■□□□□ 0.03
MID1O15344 AC020658.6-201ENST00000623564 1870 ntBASIC15.21■□□□□ 0.03
MID1O15344 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.21■□□□□ 0.03
MID1O15344 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MID1O15344 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MID1O15344 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
MID1O15344 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.21■□□□□ 0.03
MID1O15344 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MID1O15344 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MID1O15344 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
MID1O15344 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.21■□□□□ 0.03
MID1O15344 BCYRN1-201ENST00000418539 200 ntBASIC15.21■□□□□ 0.03
MID1O15344 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.21■□□□□ 0.03
MID1O15344 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.21■□□□□ 0.03
MID1O15344 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MID1O15344 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.21■□□□□ 0.03
MID1O15344 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.21■□□□□ 0.03
MID1O15344 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.21■□□□□ 0.03
MID1O15344 AP001258.2-201ENST00000529891 490 ntBASIC15.21■□□□□ 0.03
MID1O15344 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.21■□□□□ 0.03
MID1O15344 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MID1O15344 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.21■□□□□ 0.03
MID1O15344 AC138466.3-201ENST00000619983 221 ntBASIC15.21■□□□□ 0.03
MID1O15344 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.21■□□□□ 0.03
MID1O15344 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MID1O15344 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.21■□□□□ 0.03
MID1O15344 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
MID1O15344 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MID1O15344 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MID1O15344 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MID1O15344 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
MID1O15344 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MID1O15344 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.21■□□□□ 0.03
MID1O15344 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
MID1O15344 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MID1O15344 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.21■□□□□ 0.02
MID1O15344 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
MID1O15344 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MID1O15344 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MID1O15344 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MID1O15344 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.21■□□□□ 0.02
MID1O15344 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.21■□□□□ 0.02
MID1O15344 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
MID1O15344 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.2■□□□□ 0.02
MID1O15344 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.2■□□□□ 0.02
MID1O15344 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms