Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SOX1O00570 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.91■□□□□ 0.14
SOX1O00570 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SOX1O00570 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.9■□□□□ 0.14
SOX1O00570 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.9■□□□□ 0.14
SOX1O00570 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SOX1O00570 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.9■□□□□ 0.14
SOX1O00570 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 AC006529.1-201ENST00000459978 637 ntBASIC15.9■□□□□ 0.14
SOX1O00570 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC15.9■□□□□ 0.14
SOX1O00570 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC15.9■□□□□ 0.14
SOX1O00570 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.9■□□□□ 0.14
SOX1O00570 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC15.9■□□□□ 0.14
SOX1O00570 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC15.9■□□□□ 0.14
SOX1O00570 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.9■□□□□ 0.14
SOX1O00570 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.9■□□□□ 0.14
SOX1O00570 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC15.9■□□□□ 0.14
SOX1O00570 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
SOX1O00570 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SOX1O00570 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SOX1O00570 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.9■□□□□ 0.14
SOX1O00570 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SOX1O00570 AC025183.3-201ENST00000623526 1482 ntBASIC15.9■□□□□ 0.14
SOX1O00570 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.9■□□□□ 0.14
SOX1O00570 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SOX1O00570 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.9■□□□□ 0.14
SOX1O00570 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX1O00570 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX1O00570 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.89■□□□□ 0.13
SOX1O00570 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX1O00570 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SOX1O00570 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX1O00570 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.89■□□□□ 0.13
SOX1O00570 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX1O00570 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SOX1O00570 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX1O00570 MARK2P16-201ENST00000605714 1723 ntBASIC15.89■□□□□ 0.13
SOX1O00570 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX1O00570 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SOX1O00570 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX1O00570 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SOX1O00570 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC15.89■□□□□ 0.13
SOX1O00570 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.89■□□□□ 0.13
SOX1O00570 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX1O00570 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC15.89■□□□□ 0.13
SOX1O00570 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC15.89■□□□□ 0.13
SOX1O00570 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC15.89■□□□□ 0.13
SOX1O00570 AC138701.2-201ENST00000553634 226 ntBASIC15.89■□□□□ 0.13
SOX1O00570 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.89■□□□□ 0.13
SOX1O00570 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC15.89■□□□□ 0.13
SOX1O00570 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.89■□□□□ 0.13
SOX1O00570 PSME2-217ENST00000615264 874 ntTSL 5 BASIC15.89■□□□□ 0.13
SOX1O00570 PSME2-218ENST00000630027 185 ntTSL 3 BASIC15.89■□□□□ 0.13
SOX1O00570 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.89■□□□□ 0.13
SOX1O00570 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.89■□□□□ 0.13
SOX1O00570 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.89■□□□□ 0.13
SOX1O00570 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.89■□□□□ 0.13
SOX1O00570 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.89■□□□□ 0.13
SOX1O00570 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX1O00570 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX1O00570 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.89■□□□□ 0.13
SOX1O00570 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX1O00570 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX1O00570 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SOX1O00570 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SOX1O00570 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.89■□□□□ 0.13
SOX1O00570 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX1O00570 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX1O00570 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX1O00570 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
SOX1O00570 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX1O00570 REXO1L5P-201ENST00000622260 2098 ntBASIC15.88■□□□□ 0.13
SOX1O00570 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX1O00570 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX1O00570 AC005052.1-201ENST00000625181 2492 ntBASIC15.88■□□□□ 0.13
SOX1O00570 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms