Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 RNA5SP486-201ENST00000515961 83 ntBASIC17.12■□□□□ 0.33
DDX39AO00148 AC022616.1-201ENST00000518688 554 ntBASIC17.12■□□□□ 0.33
DDX39AO00148 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 AC009542.2-202ENST00000619004 1067 ntBASIC17.12■□□□□ 0.33
DDX39AO00148 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
DDX39AO00148 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.12■□□□□ 0.33
DDX39AO00148 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
DDX39AO00148 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.12■□□□□ 0.33
DDX39AO00148 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX39AO00148 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DDX39AO00148 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.11■□□□□ 0.33
DDX39AO00148 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DDX39AO00148 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.11■□□□□ 0.33
DDX39AO00148 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.11■□□□□ 0.33
DDX39AO00148 TPM3P8-201ENST00000330554 643 ntBASIC17.11■□□□□ 0.33
DDX39AO00148 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
DDX39AO00148 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.11■□□□□ 0.33
DDX39AO00148 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.11■□□□□ 0.33
DDX39AO00148 AC004466.1-201ENST00000599515 1080 ntBASIC17.11■□□□□ 0.33
DDX39AO00148 AC132938.4-201ENST00000623835 848 ntBASIC17.11■□□□□ 0.33
DDX39AO00148 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 AC126755.1-201ENST00000525846 6405 ntBASIC17.11■□□□□ 0.33
DDX39AO00148 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.11■□□□□ 0.33
DDX39AO00148 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
DDX39AO00148 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.11■□□□□ 0.33
DDX39AO00148 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
DDX39AO00148 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.11■□□□□ 0.33
DDX39AO00148 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
DDX39AO00148 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
DDX39AO00148 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.11■□□□□ 0.33
DDX39AO00148 AC012508.2-201ENST00000567613 1472 ntBASIC17.11■□□□□ 0.33
DDX39AO00148 REXO1L2P-201ENST00000425429 2069 ntBASIC17.11■□□□□ 0.33
DDX39AO00148 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
DDX39AO00148 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX39AO00148 AL354989.2-201ENST00000435838 1540 ntBASIC17.11■□□□□ 0.33
DDX39AO00148 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
DDX39AO00148 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DDX39AO00148 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.1■□□□□ 0.33
DDX39AO00148 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.1■□□□□ 0.33
DDX39AO00148 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DDX39AO00148 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.1■□□□□ 0.33
DDX39AO00148 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
DDX39AO00148 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.1■□□□□ 0.33
DDX39AO00148 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.1■□□□□ 0.33
DDX39AO00148 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DDX39AO00148 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.1■□□□□ 0.33
DDX39AO00148 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.1■□□□□ 0.33
DDX39AO00148 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.1■□□□□ 0.33
DDX39AO00148 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.1■□□□□ 0.33
DDX39AO00148 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.1■□□□□ 0.33
DDX39AO00148 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 ENPP7P14-201ENST00000621765 1040 ntBASIC17.1■□□□□ 0.33
DDX39AO00148 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.1■□□□□ 0.33
DDX39AO00148 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
DDX39AO00148 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.1■□□□□ 0.33
DDX39AO00148 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
DDX39AO00148 AC126365.1-201ENST00000578585 1514 ntBASIC17.1■□□□□ 0.33
DDX39AO00148 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.1■□□□□ 0.33
DDX39AO00148 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms