Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SBF1P1-201ENST00000444527 5631 ntBASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 AC084364.1-201ENST00000551967 1556 ntBASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA2E9PIF3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 AC022494.1-201ENST00000466044 728 ntBASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 AP005019.2-201ENST00000615104 511 ntBASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 BX539320.1-201ENST00000623759 877 ntBASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 AL162727.3-201ENST00000635661 2787 ntBASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 AC073347.1-201ENST00000421633 2643 ntBASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA2E9PIF3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 AC079316.1-201ENST00000548397 411 ntBASIC13.9□□□□□ -0.18
NPIPA2E9PIF3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms