Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 FTX-216ENST00000638985 1367 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 AHCYP4-201ENST00000419201 1315 ntBASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 RNLS-203ENST00000437752 525 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 AC010976.2-201ENST00000609697 852 ntBASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM88BA6NKF7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 KRT18P46-201ENST00000435568 1279 ntBASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 OR5BD1P-201ENST00000532527 817 ntBASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 AC068831.5-201ENST00000557387 328 ntBASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM88BA6NKF7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 AC025183.3-201ENST00000623526 1482 ntBASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 PTGER4P2-201ENST00000328411 252 ntBASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 PTGER4P3-201ENST00000458150 252 ntBASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 BCL2L12P1-201ENST00000508390 733 ntBASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 AC093826.1-201ENST00000508655 993 ntBASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 USB1-205ENST00000561743 1135 ntTSL 3 BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 AL022334.2-201ENST00000610000 484 ntBASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms