Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 AC134915.1-201ENST00000426461 574 ntBASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 MIR4745-201ENST00000577608 62 ntBASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 AC093813.1-201ENST00000605066 256 ntBASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 AL158070.2-201ENST00000623713 1621 ntBASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC162PA2VCL2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 LILRP1-201ENST00000444199 1370 ntBASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 MYCLP2-201ENST00000449268 967 ntBASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 AL359711.2-201ENST00000563105 872 ntBASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 AC007431.3-201ENST00000623221 587 ntBASIC15.27■□□□□ 0.04
CCDC162PA2VCL2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 REXO1L5P-201ENST00000622260 2098 ntBASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC162PA2VCL2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 C1QBPP1-201ENST00000400117 770 ntBASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 AC087499.6-201ENST00000411576 835 ntBASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 AL442647.2-201ENST00000429864 857 ntBASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 HLA-K-203ENST00000430151 1046 ntBASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms