Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGC4Q9Y5F7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 LRRC59-203ENST00000576448 1531 ntBASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 AC018665.1-201ENST00000622927 1362 ntBASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 AC005229.1-201ENST00000392885 409 ntBASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 ACTBP8-201ENST00000403258 1108 ntBASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 AL355864.2-201ENST00000447420 863 ntBASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 AC145423.3-201ENST00000615987 467 ntBASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 ZBED1P1-201ENST00000502364 1930 ntBASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGC4Q9Y5F7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 U91328.1-201ENST00000437528 223 ntBASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 AC239800.4-201ENST00000603712 296 ntBASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGC4Q9Y5F7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms