Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 AL359881.3-201ENST00000602640 1721 ntBASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 AC010327.5-201ENST00000586923 3061 ntBASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 IL9RP2-201ENST00000423948 1312 ntBASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 ACTG1P14-201ENST00000446382 1122 ntBASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 AC025181.2-201ENST00000606994 802 ntBASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 AC027601.4-201ENST00000611259 610 ntBASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 AC018529.1-201ENST00000613063 361 ntBASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 FAM197Y3-203ENST00000618346 717 ntBASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2D4Q9Y2X8 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 KRT8P12-202ENST00000472924 1397 ntBASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 AC055811.4-201ENST00000624039 1754 ntBASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2D4Q9Y2X8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms