Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 ACP1-203ENST00000405233 1149 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 AC097065.1-201ENST00000425737 517 ntBASIC14.63□□□□□ -0.07
LHX6Q9UPM6 ATP6AP2-204ENST00000447485 1254 ntTSL 5 BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 RN7SKP157-201ENST00000516174 282 ntBASIC14.63□□□□□ -0.07
LHX6Q9UPM6 AC024681.1-201ENST00000521917 487 ntBASIC14.63□□□□□ -0.07
LHX6Q9UPM6 MTND1P6-201ENST00000523621 946 ntBASIC14.63□□□□□ -0.07
LHX6Q9UPM6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 MIR4321-201ENST00000592276 80 ntBASIC14.63□□□□□ -0.07
LHX6Q9UPM6 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 DGAT2L7P-201ENST00000602462 744 ntBASIC14.63□□□□□ -0.07
LHX6Q9UPM6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LHX6Q9UPM6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.62□□□□□ -0.07
LHX6Q9UPM6 AC106886.4-201ENST00000623557 2502 ntBASIC14.62□□□□□ -0.07
LHX6Q9UPM6 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 AC008132.1-202ENST00000342005 1389 ntBASIC14.62□□□□□ -0.07
LHX6Q9UPM6 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 HSFY4P-201ENST00000415994 1181 ntBASIC14.62□□□□□ -0.07
LHX6Q9UPM6 LHFPL3-AS1-202ENST00000416376 866 ntTSL 3 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 FGFR3P1-201ENST00000449999 601 ntBASIC14.62□□□□□ -0.07
LHX6Q9UPM6 AL445669.2-201ENST00000454425 421 ntBASIC14.62□□□□□ -0.07
LHX6Q9UPM6 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 AC010234.1-201ENST00000494599 870 ntBASIC14.62□□□□□ -0.07
LHX6Q9UPM6 PRELID3BP7-201ENST00000503606 469 ntBASIC14.62□□□□□ -0.07
LHX6Q9UPM6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 AC005066.1-201ENST00000613582 1007 ntBASIC14.62□□□□□ -0.07
LHX6Q9UPM6 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 AC025271.4-201ENST00000621477 1726 ntBASIC14.62□□□□□ -0.07
LHX6Q9UPM6 AP000770.2-201ENST00000623694 100 ntBASIC14.62□□□□□ -0.07
LHX6Q9UPM6 AC005052.1-201ENST00000625181 2492 ntBASIC14.62□□□□□ -0.07
LHX6Q9UPM6 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 U82695.1-201ENST00000635752 1889 ntBASIC14.62□□□□□ -0.07
LHX6Q9UPM6 AC005622.1-201ENST00000636801 1703 ntBASIC14.62□□□□□ -0.07
LHX6Q9UPM6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 LINC02228-204ENST00000642115 2962 ntBASIC14.62□□□□□ -0.07
LHX6Q9UPM6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 TUBBP5-203ENST00000508529 1334 ntBASIC14.62□□□□□ -0.07
LHX6Q9UPM6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LHX6Q9UPM6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.61□□□□□ -0.07
LHX6Q9UPM6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms