Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 ACKR1-201ENST00000368121 1240 ntBASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 NUS1P3-201ENST00000423502 862 ntBASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 AL162726.2-201ENST00000438986 1017 ntBASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 AP001582.1-201ENST00000525856 295 ntBASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 CU634019.7-201ENST00000624153 1185 ntBASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 FP236241.2-201ENST00000624906 1185 ntBASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KCMF1Q9P0J7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 C8orf49-201ENST00000525043 1968 ntBASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 HLA-K-203ENST00000430151 1046 ntBASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 INE1-201ENST00000456273 945 ntBASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 AC011495.1-201ENST00000498085 584 ntBASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 SNX18-202ENST00000343017 3140 ntBASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KCMF1Q9P0J7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
KCMF1Q9P0J7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.46□□□□□ -0.1
KCMF1Q9P0J7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
KCMF1Q9P0J7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
KCMF1Q9P0J7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
KCMF1Q9P0J7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms