Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 BCAR1-209ENST00000546196 1340 ntBASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
SND1-IT1Q9HBX3 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 RPS8P6-201ENST00000426177 609 ntBASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 EMBP1-201ENST00000458200 901 ntBASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 CCDC74BP1-201ENST00000508880 1123 ntBASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 UNC93B7-201ENST00000509439 705 ntBASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 AC105233.2-201ENST00000523697 349 ntBASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 AF228730.5-201ENST00000530288 346 ntBASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 AC073389.1-201ENST00000595595 795 ntBASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 REXO1L2P-201ENST00000425429 2069 ntBASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 PCDHA5-203ENST00000614258 4248 ntBASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SND1-IT1Q9HBX3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC10.27□□□□□ -0.76
SND1-IT1Q9HBX3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
SND1-IT1Q9HBX3 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SND1-IT1Q9HBX3 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.76
SND1-IT1Q9HBX3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
SND1-IT1Q9HBX3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
SND1-IT1Q9HBX3 AL359183.1-201ENST00000623796 2132 ntBASIC10.27□□□□□ -0.77
SND1-IT1Q9HBX3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC10.27□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms