Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 FAM90A7P-201ENST00000382628 1395 ntBASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 FAM90A23P-201ENST00000400136 1395 ntBASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 RN7SKP214-201ENST00000364208 315 ntBASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 EEF1DP6-201ENST00000449232 372 ntBASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 MPRIPP1-201ENST00000452433 1089 ntBASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 RPS2P36-201ENST00000456516 831 ntBASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 TMEM198B-204ENST00000484016 896 ntBASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 SCARNA21-201ENST00000517026 139 ntBASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 MIR5572-201ENST00000583188 137 ntBASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 AL132994.2-201ENST00000603120 687 ntBASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 SPCS2P2-201ENST00000603270 608 ntBASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRC3BQ96PB8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 AC023024.2-201ENST00000623561 1993 ntBASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 PDIA3P2-201ENST00000428073 158 ntBASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 AL596276.2-201ENST00000447525 331 ntBASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 AC009779.1-201ENST00000551138 283 ntBASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 AC020922.3-201ENST00000595064 547 ntBASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC3BQ96PB8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms