Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 AC069218.1-201ENST00000435269 762 ntBASIC18.6■□□□□ 0.57
RPGRQ92834 AC008267.1-201ENST00000474858 1069 ntBASIC18.6■□□□□ 0.57
RPGRQ92834 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC18.6■□□□□ 0.57
RPGRQ92834 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC18.6■□□□□ 0.57
RPGRQ92834 RCC2P8-201ENST00000502779 1035 ntBASIC18.6■□□□□ 0.57
RPGRQ92834 IGLV3-15-201ENST00000518356 244 ntBASIC18.6■□□□□ 0.57
RPGRQ92834 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18.6■□□□□ 0.57
RPGRQ92834 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.6■□□□□ 0.57
RPGRQ92834 RTN3P1-201ENST00000536295 711 ntBASIC18.6■□□□□ 0.57
RPGRQ92834 AC103988.2-201ENST00000561804 725 ntBASIC18.6■□□□□ 0.57
RPGRQ92834 AC008805.1-201ENST00000590892 364 ntBASIC18.6■□□□□ 0.57
RPGRQ92834 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
RPGRQ92834 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.6■□□□□ 0.57
RPGRQ92834 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RPGRQ92834 REXO1L4P-201ENST00000605109 1937 ntBASIC18.6■□□□□ 0.57
RPGRQ92834 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.6■□□□□ 0.57
RPGRQ92834 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.6■□□□□ 0.57
RPGRQ92834 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.6■□□□□ 0.57
RPGRQ92834 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.59■□□□□ 0.57
RPGRQ92834 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.59■□□□□ 0.57
RPGRQ92834 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPGRQ92834 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPGRQ92834 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPGRQ92834 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.59■□□□□ 0.57
RPGRQ92834 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPGRQ92834 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPGRQ92834 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPGRQ92834 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPGRQ92834 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPGRQ92834 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPGRQ92834 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.59■□□□□ 0.57
RPGRQ92834 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.59■□□□□ 0.57
RPGRQ92834 AC092978.1-202ENST00000637590 1327 ntBASIC18.59■□□□□ 0.57
RPGRQ92834 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPGRQ92834 PDIA3P2-201ENST00000428073 158 ntBASIC18.59■□□□□ 0.57
RPGRQ92834 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.59■□□□□ 0.57
RPGRQ92834 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC18.59■□□□□ 0.57
RPGRQ92834 AC116345.2-201ENST00000512837 523 ntBASIC18.59■□□□□ 0.57
RPGRQ92834 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPGRQ92834 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPGRQ92834 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RPGRQ92834 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.59■□□□□ 0.57
RPGRQ92834 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPGRQ92834 AC132192.2-201ENST00000596206 1147 ntBASIC18.59■□□□□ 0.57
RPGRQ92834 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.59■□□□□ 0.57
RPGRQ92834 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RPGRQ92834 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPGRQ92834 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.59■□□□□ 0.57
RPGRQ92834 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPGRQ92834 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPGRQ92834 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPGRQ92834 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RPGRQ92834 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.59■□□□□ 0.57
RPGRQ92834 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RPGRQ92834 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPGRQ92834 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.58■□□□□ 0.57
RPGRQ92834 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RPGRQ92834 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPGRQ92834 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPGRQ92834 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.58■□□□□ 0.57
RPGRQ92834 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPGRQ92834 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.58■□□□□ 0.57
RPGRQ92834 NFIC-211ENST00000641145 8399 ntBASIC18.58■□□□□ 0.57
RPGRQ92834 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPGRQ92834 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RPGRQ92834 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
RPGRQ92834 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.58■□□□□ 0.57
RPGRQ92834 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPGRQ92834 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.58■□□□□ 0.56
RPGRQ92834 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.58■□□□□ 0.56
RPGRQ92834 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RPGRQ92834 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.58■□□□□ 0.56
RPGRQ92834 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.58■□□□□ 0.56
RPGRQ92834 AC009779.1-201ENST00000551138 283 ntBASIC18.58■□□□□ 0.56
RPGRQ92834 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC18.58■□□□□ 0.56
RPGRQ92834 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.58■□□□□ 0.56
RPGRQ92834 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.58■□□□□ 0.56
RPGRQ92834 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC18.58■□□□□ 0.56
RPGRQ92834 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC18.58■□□□□ 0.56
RPGRQ92834 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPGRQ92834 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPGRQ92834 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPGRQ92834 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPGRQ92834 AMT-239ENST00000636865 1914 ntTSL 5 BASIC18.58■□□□□ 0.56
RPGRQ92834 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RPGRQ92834 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.58■□□□□ 0.56
RPGRQ92834 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPGRQ92834 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPGRQ92834 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPGRQ92834 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RPGRQ92834 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPGRQ92834 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms