Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 FAM86MP-201ENST00000340703 885 ntBASIC14.46□□□□□ -0.09
TM9SF4Q92544 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 AL355994.2-201ENST00000447882 704 ntBASIC14.46□□□□□ -0.09
TM9SF4Q92544 KRT18P43-201ENST00000469825 1281 ntBASIC14.46□□□□□ -0.09
TM9SF4Q92544 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 AC124283.3-201ENST00000570869 594 ntBASIC14.46□□□□□ -0.09
TM9SF4Q92544 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
TM9SF4Q92544 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TM9SF4Q92544 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
TM9SF4Q92544 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
TM9SF4Q92544 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.46□□□□□ -0.1
TM9SF4Q92544 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TM9SF4Q92544 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.46□□□□□ -0.1
TM9SF4Q92544 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
TM9SF4Q92544 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
TM9SF4Q92544 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TM9SF4Q92544 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TM9SF4Q92544 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TM9SF4Q92544 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.45□□□□□ -0.1
TM9SF4Q92544 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 BAATP1-201ENST00000412284 1225 ntBASIC14.45□□□□□ -0.1
TM9SF4Q92544 AC074338.1-201ENST00000416825 156 ntBASIC14.45□□□□□ -0.1
TM9SF4Q92544 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 AC136604.1-201ENST00000418535 575 ntBASIC14.45□□□□□ -0.1
TM9SF4Q92544 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 ACTBP11-201ENST00000436287 1126 ntBASIC14.45□□□□□ -0.1
TM9SF4Q92544 RPL7P3-201ENST00000441388 714 ntBASIC14.45□□□□□ -0.1
TM9SF4Q92544 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 REXO1L1P-202ENST00000608646 1974 ntBASIC14.45□□□□□ -0.1
TM9SF4Q92544 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms