Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RAPGEF4Q8WZA2 AL138725.1-201ENST00000407347 1314 ntBASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 ISCA2P1-201ENST00000425548 448 ntBASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 AC012441.2-201ENST00000444843 739 ntBASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 AL353637.1-201ENST00000451571 732 ntBASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 RCC2P8-201ENST00000502779 1035 ntBASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 AC090857.1-201ENST00000527400 390 ntBASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 AC008805.1-201ENST00000590892 364 ntBASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 AC008825.2-201ENST00000603374 718 ntBASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 NAP1L6-202ENST00000641404 1222 ntBASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 AMT-239ENST00000636865 1914 ntTSL 5 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAPGEF4Q8WZA2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 AL513523.2-202ENST00000427283 2040 ntBASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 VDAC1P1-201ENST00000439229 848 ntBASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 HLA-J-204ENST00000495278 958 ntBASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 AC009779.1-201ENST00000551138 283 ntBASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 AC103988.2-201ENST00000561804 725 ntBASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 MIR5572-201ENST00000583188 137 ntBASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 AC244394.1-201ENST00000435000 1665 ntBASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 AC006058.4-201ENST00000624016 1670 ntBASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 PCDHB19P-201ENST00000570871 2371 ntBASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.75■□□□□ 0.75
RAPGEF4Q8WZA2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
RAPGEF4Q8WZA2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAPGEF4Q8WZA2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAPGEF4Q8WZA2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms