Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC148Q8NFR7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC148Q8NFR7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC148Q8NFR7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC148Q8NFR7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CCDC148Q8NFR7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CCDC148Q8NFR7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
CCDC148Q8NFR7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 ZBED1P1-201ENST00000502364 1930 ntBASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 RNU1-114P-201ENST00000365297 166 ntBASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 AL139094.1-201ENST00000405549 1188 ntBASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 RN7SL837P-201ENST00000463010 287 ntBASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 KRT18P25-201ENST00000508931 1278 ntBASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC148Q8NFR7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC148Q8NFR7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC148Q8NFR7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CCDC148Q8NFR7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC148Q8NFR7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC148Q8NFR7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CCDC148Q8NFR7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
CCDC148Q8NFR7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC148Q8NFR7 KRT8P14-201ENST00000414254 1442 ntBASIC17.58■□□□□ 0.41
CCDC148Q8NFR7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC148Q8NFR7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC148Q8NFR7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC148Q8NFR7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 COX5BP8-201ENST00000416911 349 ntBASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 ACTG1P3-201ENST00000431775 1114 ntBASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 AC114812.1-204ENST00000449669 728 ntBASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 AC007389.4-201ENST00000454674 793 ntBASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 AC022137.2-201ENST00000503482 481 ntBASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 MIR5189-201ENST00000577370 114 ntBASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 PCDHA3-202ENST00000532566 4594 ntBASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms