Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC026434.2-201ENST00000506094 1078 ntBASIC15.03■□□□□ -0
TRAM1L1Q8N609 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 AP000812.2-201ENST00000538934 718 ntBASIC15.03■□□□□ -0
TRAM1L1Q8N609 HILS1-202ENST00000545329 423 ntBASIC15.03■□□□□ -0
TRAM1L1Q8N609 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAM1L1Q8N609 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAM1L1Q8N609 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAM1L1Q8N609 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAM1L1Q8N609 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAM1L1Q8N609 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAM1L1Q8N609 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAM1L1Q8N609 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAM1L1Q8N609 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAM1L1Q8N609 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAM1L1Q8N609 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAM1L1Q8N609 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAM1L1Q8N609 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAM1L1Q8N609 OR8S1-201ENST00000310194 1080 ntBASIC15.02■□□□□ -0
TRAM1L1Q8N609 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 CNN2P8-201ENST00000421872 913 ntBASIC15.02■□□□□ -0
TRAM1L1Q8N609 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 RPL7P3-201ENST00000441388 714 ntBASIC15.02■□□□□ -0
TRAM1L1Q8N609 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAM1L1Q8N609 RNA5SP486-201ENST00000515961 83 ntBASIC15.02■□□□□ -0
TRAM1L1Q8N609 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.02■□□□□ -0
TRAM1L1Q8N609 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRAM1L1Q8N609 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAM1L1Q8N609 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TRAM1L1Q8N609 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.02□□□□□ -0.01
TRAM1L1Q8N609 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAM1L1Q8N609 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAM1L1Q8N609 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAM1L1Q8N609 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAM1L1Q8N609 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRAM1L1Q8N609 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TRAM1L1Q8N609 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.02□□□□□ -0.01
TRAM1L1Q8N609 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAM1L1Q8N609 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAM1L1Q8N609 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAM1L1Q8N609 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 AC006058.4-201ENST00000624016 1670 ntBASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 TPM3P8-201ENST00000330554 643 ntBASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 GK-202ENST00000378941 458 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 FAM197Y7-201ENST00000432892 766 ntBASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 KLF2P4-201ENST00000451959 1225 ntBASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 312.5 ms