Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 C1QBPP1-201ENST00000400117 770 ntBASIC13.83□□□□□ -0.2
ATG4DQ86TL0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 BX539320.1-201ENST00000623759 877 ntBASIC13.83□□□□□ -0.2
ATG4DQ86TL0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATG4DQ86TL0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 KRT8P22-201ENST00000562317 1415 ntBASIC13.82□□□□□ -0.2
ATG4DQ86TL0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 AC087499.6-201ENST00000411576 835 ntBASIC13.82□□□□□ -0.2
ATG4DQ86TL0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 AL359711.2-201ENST00000563105 872 ntBASIC13.82□□□□□ -0.2
ATG4DQ86TL0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 CTBP2P3-201ENST00000585629 1255 ntBASIC13.82□□□□□ -0.2
ATG4DQ86TL0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 TMEM261P1-201ENST00000604899 340 ntBASIC13.82□□□□□ -0.2
ATG4DQ86TL0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 LINC00552-201ENST00000625151 2579 ntBASIC13.82□□□□□ -0.2
ATG4DQ86TL0 AC018442.1-201ENST00000421439 2061 ntBASIC13.82□□□□□ -0.2
ATG4DQ86TL0 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 AL137783.1-201ENST00000623494 1896 ntBASIC13.82□□□□□ -0.2
ATG4DQ86TL0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATG4DQ86TL0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.81□□□□□ -0.2
ATG4DQ86TL0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms