Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 MEP1AP4-201ENST00000423244 1087 ntBASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 TSPY16P-201ENST00000449843 468 ntBASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 BRI3BPP1-201ENST00000594224 787 ntBASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 AC011467.4-201ENST00000594891 528 ntBASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NHLRC1Q6VVB1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 AC093004.1-201ENST00000508850 424 ntBASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.74□□□□□ -0.21
NHLRC1Q6VVB1 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms