Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 AC003101.2-201ENST00000612557 442 ntBASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 ACE3P-201ENST00000423435 1973 ntBASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 Z92544.3-201ENST00000624747 417 ntBASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PPP4R4Q6NUP7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PPP4R4Q6NUP7 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
PPP4R4Q6NUP7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PPP4R4Q6NUP7 AL589702.1-201ENST00000641229 1509 ntBASIC14.71□□□□□ -0.06
PPP4R4Q6NUP7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PPP4R4Q6NUP7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.06
PPP4R4Q6NUP7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
PPP4R4Q6NUP7 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.71□□□□□ -0.06
PPP4R4Q6NUP7 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 ALG1L8P-201ENST00000533887 760 ntBASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 AC027796.2-201ENST00000575326 344 ntBASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 AC092135.3-201ENST00000624151 1846 ntBASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PPP4R4Q6NUP7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms