Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 AL591424.1-201ENST00000442569 1213 ntBASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 TIMM8BP1-201ENST00000452384 211 ntBASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 TPT1P11-201ENST00000458482 498 ntBASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 AC069335.1-201ENST00000489972 472 ntBASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 BANF1P1-201ENST00000553684 263 ntBASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 AC025181.2-201ENST00000606994 802 ntBASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 AC055717.3-201ENST00000622967 595 ntBASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 IMPDH1P4-201ENST00000445028 1534 ntBASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 AC055811.4-201ENST00000624039 1754 ntBASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 MBLAC2-202ENST00000514906 1936 ntBASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 AL450487.1-201ENST00000426799 995 ntBASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 AL592309.1-201ENST00000443127 649 ntBASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 KRT18P3-201ENST00000451602 1288 ntBASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms