Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDH1Q08174 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDH1Q08174 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH1Q08174 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH1Q08174 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH1Q08174 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDH1Q08174 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDH1Q08174 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDH1Q08174 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDH1Q08174 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.74□□□□□ -0.05
PCDH1Q08174 VDAC1P7-201ENST00000462417 847 ntBASIC14.74□□□□□ -0.05
PCDH1Q08174 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.74□□□□□ -0.05
PCDH1Q08174 TMEM261P1-201ENST00000604899 340 ntBASIC14.74□□□□□ -0.05
PCDH1Q08174 AC093726.1-201ENST00000608064 963 ntBASIC14.74□□□□□ -0.05
PCDH1Q08174 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH1Q08174 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDH1Q08174 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
PCDH1Q08174 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PCDH1Q08174 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH1Q08174 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PCDH1Q08174 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PCDH1Q08174 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDH1Q08174 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDH1Q08174 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
PCDH1Q08174 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
PCDH1Q08174 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
PCDH1Q08174 MYO15B-237ENST00000642007 4893 ntBASIC14.73□□□□□ -0.05
PCDH1Q08174 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDH1Q08174 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDH1Q08174 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
PCDH1Q08174 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PCDH1Q08174 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
PCDH1Q08174 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDH1Q08174 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.73□□□□□ -0.05
PCDH1Q08174 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.73□□□□□ -0.05
PCDH1Q08174 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.73□□□□□ -0.05
PCDH1Q08174 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDH1Q08174 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDH1Q08174 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 AC092552.1-201ENST00000547243 906 ntBASIC14.73□□□□□ -0.05
PCDH1Q08174 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 AC120045.2-201ENST00000567334 178 ntBASIC14.73□□□□□ -0.05
PCDH1Q08174 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 MIR8072-201ENST00000614241 80 ntBASIC14.73□□□□□ -0.05
PCDH1Q08174 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDH1Q08174 AL603764.1-201ENST00000636452 321 ntBASIC14.73□□□□□ -0.05
PCDH1Q08174 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PCDH1Q08174 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
PCDH1Q08174 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDH1Q08174 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PCDH1Q08174 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 AL158070.2-201ENST00000623713 1621 ntBASIC14.73□□□□□ -0.05
PCDH1Q08174 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH1Q08174 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PCDH1Q08174 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
PCDH1Q08174 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PCDH1Q08174 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDH1Q08174 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
PCDH1Q08174 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PCDH1Q08174 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
PCDH1Q08174 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDH1Q08174 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
PCDH1Q08174 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDH1Q08174 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PCDH1Q08174 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 INTS4P2-202ENST00000614726 2019 ntBASIC14.72□□□□□ -0.05
PCDH1Q08174 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDH1Q08174 AC007292.2-201ENST00000593524 1812 ntBASIC14.72□□□□□ -0.05
PCDH1Q08174 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDH1Q08174 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms