Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.51□□□□□ -0.09
SKP1P63208 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.51□□□□□ -0.09
SKP1P63208 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.51□□□□□ -0.09
SKP1P63208 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.51□□□□□ -0.09
SKP1P63208 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SKP1P63208 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 CICP11-201ENST00000434745 2827 ntBASIC14.51□□□□□ -0.09
SKP1P63208 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.51□□□□□ -0.09
SKP1P63208 AC005229.1-201ENST00000392885 409 ntBASIC14.51□□□□□ -0.09
SKP1P63208 AL139094.1-201ENST00000405549 1188 ntBASIC14.51□□□□□ -0.09
SKP1P63208 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
SKP1P63208 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.51□□□□□ -0.09
SKP1P63208 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.51□□□□□ -0.09
SKP1P63208 AC012441.1-201ENST00000446669 685 ntBASIC14.51□□□□□ -0.09
SKP1P63208 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.51□□□□□ -0.09
SKP1P63208 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.51□□□□□ -0.09
SKP1P63208 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.51□□□□□ -0.09
SKP1P63208 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
SKP1P63208 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.51□□□□□ -0.09
SKP1P63208 AL022328.1-201ENST00000610050 478 ntBASIC14.51□□□□□ -0.09
SKP1P63208 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.51□□□□□ -0.09
SKP1P63208 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.51□□□□□ -0.09
SKP1P63208 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.51□□□□□ -0.09
SKP1P63208 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.51□□□□□ -0.09
SKP1P63208 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SKP1P63208 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
SKP1P63208 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.5□□□□□ -0.09
SKP1P63208 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.5□□□□□ -0.09
SKP1P63208 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SKP1P63208 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SKP1P63208 KRT8P14-201ENST00000414254 1442 ntBASIC14.5□□□□□ -0.09
SKP1P63208 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SKP1P63208 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SKP1P63208 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SKP1P63208 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SKP1P63208 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.5□□□□□ -0.09
SKP1P63208 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SKP1P63208 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SKP1P63208 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.5□□□□□ -0.09
SKP1P63208 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SKP1P63208 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SKP1P63208 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SKP1P63208 ACTBP8-201ENST00000403258 1108 ntBASIC14.5□□□□□ -0.09
SKP1P63208 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.5□□□□□ -0.09
SKP1P63208 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SKP1P63208 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SKP1P63208 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SKP1P63208 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.5□□□□□ -0.09
SKP1P63208 CLUHP6-201ENST00000580789 941 ntBASIC14.5□□□□□ -0.09
SKP1P63208 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.5□□□□□ -0.09
SKP1P63208 AL035252.4-201ENST00000624174 288 ntBASIC14.5□□□□□ -0.09
SKP1P63208 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SKP1P63208 AC023024.2-201ENST00000623561 1993 ntBASIC14.5□□□□□ -0.09
SKP1P63208 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SKP1P63208 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.5□□□□□ -0.09
SKP1P63208 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.5□□□□□ -0.09
SKP1P63208 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
SKP1P63208 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SKP1P63208 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.5□□□□□ -0.09
SKP1P63208 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.5□□□□□ -0.09
SKP1P63208 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SKP1P63208 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SKP1P63208 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SKP1P63208 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.5□□□□□ -0.09
SKP1P63208 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SKP1P63208 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SKP1P63208 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.49□□□□□ -0.09
SKP1P63208 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
SKP1P63208 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SKP1P63208 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SKP1P63208 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms