Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ANKRD19P-201ENST00000338192 862 ntBASIC11.17□□□□□ -0.62
APOC4P55056 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC11.17□□□□□ -0.62
APOC4P55056 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 MPV17-205ENST00000402310 906 ntTSL 5 BASIC11.17□□□□□ -0.62
APOC4P55056 MPV17-206ENST00000402722 827 ntTSL 3 BASIC11.17□□□□□ -0.62
APOC4P55056 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC11.17□□□□□ -0.62
APOC4P55056 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC11.17□□□□□ -0.62
APOC4P55056 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 GHSR-202ENST00000427970 912 ntBASIC11.17□□□□□ -0.62
APOC4P55056 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC11.17□□□□□ -0.62
APOC4P55056 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.17□□□□□ -0.62
APOC4P55056 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC11.17□□□□□ -0.62
APOC4P55056 AC119751.2-201ENST00000504529 210 ntBASIC11.17□□□□□ -0.62
APOC4P55056 MFF-223ENST00000524634 647 ntTSL 2 BASIC11.17□□□□□ -0.62
APOC4P55056 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC11.17□□□□□ -0.62
APOC4P55056 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC11.17□□□□□ -0.62
APOC4P55056 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC11.17□□□□□ -0.62
APOC4P55056 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
APOC4P55056 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC11.17□□□□□ -0.62
APOC4P55056 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.17□□□□□ -0.62
APOC4P55056 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC11.17□□□□□ -0.62
APOC4P55056 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC11.17□□□□□ -0.62
APOC4P55056 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
APOC4P55056 ENPP7P14-201ENST00000621765 1040 ntBASIC11.17□□□□□ -0.62
APOC4P55056 AC008687.7-202ENST00000637404 953 ntBASIC11.17□□□□□ -0.62
APOC4P55056 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.17□□□□□ -0.62
APOC4P55056 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
APOC4P55056 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC11.17□□□□□ -0.62
APOC4P55056 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.17□□□□□ -0.62
APOC4P55056 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
APOC4P55056 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC11.17□□□□□ -0.62
APOC4P55056 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.17□□□□□ -0.62
APOC4P55056 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
APOC4P55056 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
APOC4P55056 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
APOC4P55056 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 TUBB1P2-201ENST00000422712 1306 ntBASIC11.16□□□□□ -0.62
APOC4P55056 TUBB1P1-201ENST00000503144 1300 ntBASIC11.16□□□□□ -0.62
APOC4P55056 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
APOC4P55056 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
APOC4P55056 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
APOC4P55056 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC11.16□□□□□ -0.62
APOC4P55056 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 LSM5-207ENST00000410044 687 ntTSL 3 BASIC11.16□□□□□ -0.62
APOC4P55056 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
APOC4P55056 AC099336.1-201ENST00000417053 1171 ntBASIC11.16□□□□□ -0.62
APOC4P55056 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 FAM197Y7-201ENST00000432892 766 ntBASIC11.16□□□□□ -0.62
APOC4P55056 AC245100.3-201ENST00000441281 285 ntBASIC11.16□□□□□ -0.62
APOC4P55056 AL355994.2-201ENST00000447882 704 ntBASIC11.16□□□□□ -0.62
APOC4P55056 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 BNIP3P42-201ENST00000454982 569 ntBASIC11.16□□□□□ -0.62
APOC4P55056 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC11.16□□□□□ -0.62
APOC4P55056 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
APOC4P55056 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
APOC4P55056 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC11.16□□□□□ -0.62
APOC4P55056 RN7SL219P-201ENST00000582872 296 ntBASIC11.16□□□□□ -0.62
APOC4P55056 BNIP3P29-201ENST00000598302 571 ntBASIC11.16□□□□□ -0.62
APOC4P55056 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC11.16□□□□□ -0.62
APOC4P55056 AC011447.5-201ENST00000616168 564 ntBASIC11.16□□□□□ -0.62
APOC4P55056 WNT11-204ENST00000621122 789 ntTSL 5 BASIC11.16□□□□□ -0.62
APOC4P55056 AC006453.4-201ENST00000636949 1252 ntBASIC11.16□□□□□ -0.62
APOC4P55056 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC11.16□□□□□ -0.62
APOC4P55056 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
APOC4P55056 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
APOC4P55056 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC11.16□□□□□ -0.62
APOC4P55056 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 AL138709.1-201ENST00000614840 1693 ntBASIC11.16□□□□□ -0.62
APOC4P55056 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOC4P55056 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms