Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.82□□□□□ -0.04
PDX1P52945 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.82□□□□□ -0.04
PDX1P52945 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.82□□□□□ -0.04
PDX1P52945 AL008638.5-201ENST00000623814 1298 ntBASIC14.82□□□□□ -0.04
PDX1P52945 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PDX1P52945 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDX1P52945 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDX1P52945 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDX1P52945 AC144831.1-201ENST00000573312 2656 ntBASIC14.82□□□□□ -0.04
PDX1P52945 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDX1P52945 SSR4P1-203ENST00000599569 2260 ntBASIC14.82□□□□□ -0.04
PDX1P52945 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDX1P52945 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDX1P52945 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.82□□□□□ -0.04
PDX1P52945 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDX1P52945 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDX1P52945 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.82□□□□□ -0.04
PDX1P52945 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.82□□□□□ -0.04
PDX1P52945 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDX1P52945 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PDX1P52945 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDX1P52945 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDX1P52945 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDX1P52945 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.81□□□□□ -0.04
PDX1P52945 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDX1P52945 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.81□□□□□ -0.04
PDX1P52945 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDX1P52945 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.81□□□□□ -0.04
PDX1P52945 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDX1P52945 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PDX1P52945 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PDX1P52945 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDX1P52945 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDX1P52945 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.81□□□□□ -0.04
PDX1P52945 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PDX1P52945 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDX1P52945 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDX1P52945 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.81□□□□□ -0.04
PDX1P52945 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.81□□□□□ -0.04
PDX1P52945 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PDX1P52945 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PDX1P52945 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PDX1P52945 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDX1P52945 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PDX1P52945 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.81□□□□□ -0.04
PDX1P52945 MIR1202-201ENST00000408529 83 ntBASIC14.81□□□□□ -0.04
PDX1P52945 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.81□□□□□ -0.04
PDX1P52945 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDX1P52945 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.81□□□□□ -0.04
PDX1P52945 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.81□□□□□ -0.04
PDX1P52945 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PDX1P52945 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDX1P52945 ECM1P1-201ENST00000604092 1279 ntBASIC14.81□□□□□ -0.04
PDX1P52945 AL022328.3-201ENST00000607943 679 ntBASIC14.81□□□□□ -0.04
PDX1P52945 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDX1P52945 BX539320.1-201ENST00000623759 877 ntBASIC14.81□□□□□ -0.04
PDX1P52945 AC132938.4-201ENST00000623835 848 ntBASIC14.81□□□□□ -0.04
PDX1P52945 AC006453.4-201ENST00000636949 1252 ntBASIC14.81□□□□□ -0.04
PDX1P52945 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDX1P52945 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDX1P52945 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PDX1P52945 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.81□□□□□ -0.04
PDX1P52945 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.81□□□□□ -0.04
PDX1P52945 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDX1P52945 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.81□□□□□ -0.04
PDX1P52945 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDX1P52945 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.81□□□□□ -0.04
PDX1P52945 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
PDX1P52945 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.8□□□□□ -0.04
PDX1P52945 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.8□□□□□ -0.04
PDX1P52945 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.8□□□□□ -0.04
PDX1P52945 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDX1P52945 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.8□□□□□ -0.04
PDX1P52945 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PDX1P52945 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PDX1P52945 KLF2P2-201ENST00000416807 1039 ntBASIC14.8□□□□□ -0.04
PDX1P52945 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms