Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC104989.1-201ENST00000519711 778 ntBASIC17.17■□□□□ 0.34
USP11P51784 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP11P51784 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.17■□□□□ 0.34
USP11P51784 AP005482.1-201ENST00000563722 1273 ntBASIC17.17■□□□□ 0.34
USP11P51784 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.17■□□□□ 0.34
USP11P51784 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.17■□□□□ 0.34
USP11P51784 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.17■□□□□ 0.34
USP11P51784 RHOXF1P1-202ENST00000635473 501 ntBASIC17.17■□□□□ 0.34
USP11P51784 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
USP11P51784 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
USP11P51784 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP11P51784 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
USP11P51784 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.17■□□□□ 0.34
USP11P51784 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.17■□□□□ 0.34
USP11P51784 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
USP11P51784 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP11P51784 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
USP11P51784 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP11P51784 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.16■□□□□ 0.34
USP11P51784 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.16■□□□□ 0.34
USP11P51784 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP11P51784 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
USP11P51784 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP11P51784 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.16■□□□□ 0.34
USP11P51784 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP11P51784 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP11P51784 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.16■□□□□ 0.34
USP11P51784 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
USP11P51784 ANKRD19P-201ENST00000338192 862 ntBASIC17.16■□□□□ 0.34
USP11P51784 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.16■□□□□ 0.34
USP11P51784 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.16■□□□□ 0.34
USP11P51784 FAM197Y7-201ENST00000432892 766 ntBASIC17.16■□□□□ 0.34
USP11P51784 CTBP2P5-201ENST00000454986 1264 ntBASIC17.16■□□□□ 0.34
USP11P51784 FO681548.1-201ENST00000455617 1132 ntBASIC17.16■□□□□ 0.34
USP11P51784 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.16■□□□□ 0.34
USP11P51784 IGHV3-71-201ENST00000523324 359 ntBASIC17.16■□□□□ 0.34
USP11P51784 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
USP11P51784 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.16■□□□□ 0.34
USP11P51784 SNX29P1-201ENST00000548357 1007 ntBASIC17.16■□□□□ 0.34
USP11P51784 AC079316.1-201ENST00000548397 411 ntBASIC17.16■□□□□ 0.34
USP11P51784 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.16■□□□□ 0.34
USP11P51784 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.16■□□□□ 0.34
USP11P51784 AC004466.1-201ENST00000599515 1080 ntBASIC17.16■□□□□ 0.34
USP11P51784 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
USP11P51784 AC006453.4-201ENST00000636949 1252 ntBASIC17.16■□□□□ 0.34
USP11P51784 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.16■□□□□ 0.34
USP11P51784 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
USP11P51784 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.16■□□□□ 0.34
USP11P51784 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP11P51784 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP11P51784 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP11P51784 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP11P51784 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP11P51784 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP11P51784 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
USP11P51784 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP11P51784 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
USP11P51784 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.15■□□□□ 0.34
USP11P51784 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.15■□□□□ 0.34
USP11P51784 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.15■□□□□ 0.34
USP11P51784 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.15■□□□□ 0.34
USP11P51784 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.15■□□□□ 0.34
USP11P51784 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
USP11P51784 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
USP11P51784 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
USP11P51784 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.15■□□□□ 0.34
USP11P51784 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
USP11P51784 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.15■□□□□ 0.34
USP11P51784 MESTP3-201ENST00000503460 968 ntBASIC17.15■□□□□ 0.34
USP11P51784 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.15■□□□□ 0.34
USP11P51784 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.15■□□□□ 0.34
USP11P51784 AC078819.1-201ENST00000547454 765 ntBASIC17.15■□□□□ 0.34
USP11P51784 AC012085.1-201ENST00000548270 765 ntBASIC17.15■□□□□ 0.34
USP11P51784 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.15■□□□□ 0.34
USP11P51784 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.15■□□□□ 0.34
USP11P51784 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.15■□□□□ 0.34
USP11P51784 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.15■□□□□ 0.34
USP11P51784 MIR6805-201ENST00000615055 62 ntBASIC17.15■□□□□ 0.34
USP11P51784 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
USP11P51784 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
USP11P51784 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
USP11P51784 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms