Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ARCN1P48444 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ARCN1P48444 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.29■□□□□ 0.04
ARCN1P48444 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.29■□□□□ 0.04
ARCN1P48444 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.29■□□□□ 0.04
ARCN1P48444 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARCN1P48444 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ARCN1P48444 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.28■□□□□ 0.04
ARCN1P48444 AC005912.2-201ENST00000619492 2400 ntBASIC15.28■□□□□ 0.04
ARCN1P48444 MTHFR-210ENST00000641407 2387 ntBASIC15.28■□□□□ 0.04
ARCN1P48444 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARCN1P48444 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.28■□□□□ 0.04
ARCN1P48444 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.28■□□□□ 0.04
ARCN1P48444 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.28■□□□□ 0.04
ARCN1P48444 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ARCN1P48444 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARCN1P48444 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ARCN1P48444 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARCN1P48444 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.28■□□□□ 0.04
ARCN1P48444 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARCN1P48444 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.28■□□□□ 0.04
ARCN1P48444 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARCN1P48444 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.28■□□□□ 0.04
ARCN1P48444 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.28■□□□□ 0.04
ARCN1P48444 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.28■□□□□ 0.04
ARCN1P48444 RN7SL692P-201ENST00000464677 288 ntBASIC15.28■□□□□ 0.04
ARCN1P48444 AC093004.1-201ENST00000508850 424 ntBASIC15.28■□□□□ 0.04
ARCN1P48444 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.28■□□□□ 0.04
ARCN1P48444 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.28■□□□□ 0.04
ARCN1P48444 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.28■□□□□ 0.04
ARCN1P48444 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.28■□□□□ 0.04
ARCN1P48444 BRI3BPP1-201ENST00000594224 787 ntBASIC15.28■□□□□ 0.04
ARCN1P48444 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.28■□□□□ 0.04
ARCN1P48444 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.28■□□□□ 0.04
ARCN1P48444 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.28■□□□□ 0.04
ARCN1P48444 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARCN1P48444 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARCN1P48444 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ARCN1P48444 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ARCN1P48444 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARCN1P48444 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
ARCN1P48444 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARCN1P48444 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARCN1P48444 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.28■□□□□ 0.04
ARCN1P48444 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARCN1P48444 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ARCN1P48444 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ARCN1P48444 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARCN1P48444 AL158070.2-201ENST00000623713 1621 ntBASIC15.28■□□□□ 0.04
ARCN1P48444 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARCN1P48444 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.28■□□□□ 0.04
ARCN1P48444 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ARCN1P48444 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ARCN1P48444 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ARCN1P48444 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ARCN1P48444 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ARCN1P48444 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ARCN1P48444 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ARCN1P48444 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.27■□□□□ 0.04
ARCN1P48444 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.27■□□□□ 0.04
ARCN1P48444 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.27■□□□□ 0.04
ARCN1P48444 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.27■□□□□ 0.04
ARCN1P48444 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.27■□□□□ 0.04
ARCN1P48444 SLC7A15P-201ENST00000424028 1363 ntBASIC15.27■□□□□ 0.04
ARCN1P48444 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ARCN1P48444 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
ARCN1P48444 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ARCN1P48444 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.27■□□□□ 0.04
ARCN1P48444 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ARCN1P48444 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
ARCN1P48444 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
ARCN1P48444 AC244107.1-201ENST00000442033 332 ntBASIC15.27■□□□□ 0.04
ARCN1P48444 VDAC1P7-201ENST00000462417 847 ntBASIC15.27■□□□□ 0.04
ARCN1P48444 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.27■□□□□ 0.04
ARCN1P48444 AC055876.2-201ENST00000531834 546 ntBASIC15.27■□□□□ 0.04
ARCN1P48444 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.27■□□□□ 0.04
ARCN1P48444 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.27■□□□□ 0.04
ARCN1P48444 RRP7BP-205ENST00000566851 833 ntBASIC15.27■□□□□ 0.04
ARCN1P48444 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.27■□□□□ 0.04
ARCN1P48444 AC140912.1-201ENST00000577171 1054 ntBASIC15.27■□□□□ 0.04
ARCN1P48444 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.27■□□□□ 0.04
ARCN1P48444 MIR8072-201ENST00000614241 80 ntBASIC15.27■□□□□ 0.04
ARCN1P48444 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.27■□□□□ 0.04
ARCN1P48444 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.27■□□□□ 0.03
ARCN1P48444 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ARCN1P48444 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.27■□□□□ 0.03
ARCN1P48444 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.27■□□□□ 0.03
ARCN1P48444 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
ARCN1P48444 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ARCN1P48444 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ARCN1P48444 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ARCN1P48444 AC007686.3-201ENST00000619017 3487 ntBASIC15.27■□□□□ 0.03
ARCN1P48444 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms