Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.8□□□□□ -0.2
APOBEC1P41238 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.8□□□□□ -0.2
APOBEC1P41238 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.8□□□□□ -0.2
APOBEC1P41238 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.8□□□□□ -0.2
APOBEC1P41238 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
APOBEC1P41238 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
APOBEC1P41238 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.8□□□□□ -0.2
APOBEC1P41238 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
APOBEC1P41238 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.8□□□□□ -0.2
APOBEC1P41238 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 AL359258.3-201ENST00000622910 2331 ntBASIC13.8□□□□□ -0.2
APOBEC1P41238 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 KRT8P14-201ENST00000414254 1442 ntBASIC13.8□□□□□ -0.2
APOBEC1P41238 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.8□□□□□ -0.2
APOBEC1P41238 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
APOBEC1P41238 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
APOBEC1P41238 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.79□□□□□ -0.2
APOBEC1P41238 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
APOBEC1P41238 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.79□□□□□ -0.2
APOBEC1P41238 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.79□□□□□ -0.2
APOBEC1P41238 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
APOBEC1P41238 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
APOBEC1P41238 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
APOBEC1P41238 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.79□□□□□ -0.2
APOBEC1P41238 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.79□□□□□ -0.2
APOBEC1P41238 HLA-K-203ENST00000430151 1046 ntBASIC13.79□□□□□ -0.2
APOBEC1P41238 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.79□□□□□ -0.2
APOBEC1P41238 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.79□□□□□ -0.2
APOBEC1P41238 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.79□□□□□ -0.2
APOBEC1P41238 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.79□□□□□ -0.2
APOBEC1P41238 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.79□□□□□ -0.2
APOBEC1P41238 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.79□□□□□ -0.2
APOBEC1P41238 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.79□□□□□ -0.2
APOBEC1P41238 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.79□□□□□ -0.2
APOBEC1P41238 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.79□□□□□ -0.2
APOBEC1P41238 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.79□□□□□ -0.2
APOBEC1P41238 AC005252.2-201ENST00000624630 1141 ntBASIC13.79□□□□□ -0.2
APOBEC1P41238 AC025048.6-201ENST00000634326 1161 ntBASIC13.79□□□□□ -0.2
APOBEC1P41238 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.79□□□□□ -0.2
APOBEC1P41238 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
APOBEC1P41238 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
APOBEC1P41238 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 REXO1L5P-201ENST00000622260 2098 ntBASIC13.79□□□□□ -0.2
APOBEC1P41238 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 LINC00528-201ENST00000600723 2160 ntBASIC13.79□□□□□ -0.2
APOBEC1P41238 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.79□□□□□ -0.2
APOBEC1P41238 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.79□□□□□ -0.2
APOBEC1P41238 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
APOBEC1P41238 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
APOBEC1P41238 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOBEC1P41238 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 LINC01101-201ENST00000622953 1884 ntBASIC13.78□□□□□ -0.2
APOBEC1P41238 AL157414.3-201ENST00000624276 1954 ntBASIC13.78□□□□□ -0.2
APOBEC1P41238 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
APOBEC1P41238 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
APOBEC1P41238 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.78□□□□□ -0.2
APOBEC1P41238 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.78□□□□□ -0.2
APOBEC1P41238 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.78□□□□□ -0.2
APOBEC1P41238 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.78□□□□□ -0.2
APOBEC1P41238 KLF2P2-201ENST00000416807 1039 ntBASIC13.78□□□□□ -0.2
APOBEC1P41238 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.78□□□□□ -0.2
APOBEC1P41238 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms