Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.49■□□□□ 0.07
HADHAP40939 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HADHAP40939 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.49■□□□□ 0.07
HADHAP40939 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.48■□□□□ 0.07
HADHAP40939 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.48■□□□□ 0.07
HADHAP40939 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.48■□□□□ 0.07
HADHAP40939 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.48■□□□□ 0.07
HADHAP40939 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
HADHAP40939 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.48■□□□□ 0.07
HADHAP40939 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 CICP11-201ENST00000434745 2827 ntBASIC15.48■□□□□ 0.07
HADHAP40939 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.48■□□□□ 0.07
HADHAP40939 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.48■□□□□ 0.07
HADHAP40939 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 AL035633.1-201ENST00000406139 838 ntBASIC15.48■□□□□ 0.07
HADHAP40939 SPTLC1P1-201ENST00000447199 261 ntBASIC15.48■□□□□ 0.07
HADHAP40939 RN7SL399P-201ENST00000471648 279 ntBASIC15.48■□□□□ 0.07
HADHAP40939 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.48■□□□□ 0.07
HADHAP40939 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.48■□□□□ 0.07
HADHAP40939 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.48■□□□□ 0.07
HADHAP40939 AC138761.1-201ENST00000584393 385 ntBASIC15.48■□□□□ 0.07
HADHAP40939 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
HADHAP40939 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 AC099568.2-201ENST00000609194 695 ntBASIC15.48■□□□□ 0.07
HADHAP40939 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.48■□□□□ 0.07
HADHAP40939 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HADHAP40939 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.48■□□□□ 0.07
HADHAP40939 AL391825.1-201ENST00000457671 1364 ntBASIC15.48■□□□□ 0.07
HADHAP40939 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HADHAP40939 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
HADHAP40939 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HADHAP40939 ACE3P-201ENST00000423435 1973 ntBASIC15.47■□□□□ 0.07
HADHAP40939 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HADHAP40939 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HADHAP40939 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.47■□□□□ 0.07
HADHAP40939 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.47■□□□□ 0.07
HADHAP40939 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HADHAP40939 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
HADHAP40939 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.47■□□□□ 0.07
HADHAP40939 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HADHAP40939 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.47■□□□□ 0.07
HADHAP40939 FAM86LP-201ENST00000478302 853 ntBASIC15.47■□□□□ 0.07
HADHAP40939 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.47■□□□□ 0.07
HADHAP40939 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
HADHAP40939 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
HADHAP40939 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.47■□□□□ 0.07
HADHAP40939 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms