Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.37□□□□□ -0.27
GDNFP39905 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.37□□□□□ -0.27
GDNFP39905 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.37□□□□□ -0.27
GDNFP39905 SPTSSB-204ENST00000617024 1292 ntBASIC13.37□□□□□ -0.27
GDNFP39905 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.37□□□□□ -0.27
GDNFP39905 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.37□□□□□ -0.27
GDNFP39905 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.36□□□□□ -0.27
GDNFP39905 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.36□□□□□ -0.27
GDNFP39905 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.36□□□□□ -0.27
GDNFP39905 AC011474.4-201ENST00000623523 2076 ntBASIC13.36□□□□□ -0.27
GDNFP39905 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.36□□□□□ -0.27
GDNFP39905 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.36□□□□□ -0.27
GDNFP39905 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
GDNFP39905 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.36□□□□□ -0.27
GDNFP39905 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
GDNFP39905 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
GDNFP39905 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
GDNFP39905 UXT-AS1-201ENST00000590504 1525 ntBASIC13.36□□□□□ -0.27
GDNFP39905 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 MIR346-201ENST00000362234 95 ntBASIC13.36□□□□□ -0.27
GDNFP39905 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
GDNFP39905 RPL5P21-201ENST00000404620 815 ntBASIC13.36□□□□□ -0.27
GDNFP39905 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.36□□□□□ -0.27
GDNFP39905 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.36□□□□□ -0.27
GDNFP39905 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.36□□□□□ -0.27
GDNFP39905 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.36□□□□□ -0.27
GDNFP39905 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.36□□□□□ -0.27
GDNFP39905 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.36□□□□□ -0.27
GDNFP39905 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.36□□□□□ -0.27
GDNFP39905 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.36□□□□□ -0.27
GDNFP39905 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.36□□□□□ -0.27
GDNFP39905 SLC25A39P2-201ENST00000537614 270 ntBASIC13.36□□□□□ -0.27
GDNFP39905 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.36□□□□□ -0.27
GDNFP39905 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.36□□□□□ -0.27
GDNFP39905 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.36□□□□□ -0.27
GDNFP39905 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.36□□□□□ -0.27
GDNFP39905 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.36□□□□□ -0.27
GDNFP39905 AC012183.1-201ENST00000625197 499 ntBASIC13.36□□□□□ -0.27
GDNFP39905 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.36□□□□□ -0.27
GDNFP39905 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
GDNFP39905 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
GDNFP39905 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.36□□□□□ -0.27
GDNFP39905 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 AC089987.1-201ENST00000551654 2209 ntBASIC13.36□□□□□ -0.27
GDNFP39905 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
GDNFP39905 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
GDNFP39905 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.36□□□□□ -0.27
GDNFP39905 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
GDNFP39905 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
GDNFP39905 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GDNFP39905 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.36□□□□□ -0.27
GDNFP39905 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 CICP8-201ENST00000455800 2813 ntBASIC13.35□□□□□ -0.27
GDNFP39905 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms