Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.16■□□□□ 0.02
HMGCLP35914 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 NORAD-201ENST00000565493 5339 ntBASIC15.15■□□□□ 0.02
HMGCLP35914 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HMGCLP35914 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.15■□□□□ 0.02
HMGCLP35914 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.15■□□□□ 0.02
HMGCLP35914 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HMGCLP35914 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HMGCLP35914 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.15■□□□□ 0.02
HMGCLP35914 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
HMGCLP35914 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HMGCLP35914 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 AL355864.2-201ENST00000447420 863 ntBASIC15.15■□□□□ 0.02
HMGCLP35914 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HMGCLP35914 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.15■□□□□ 0.02
HMGCLP35914 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
HMGCLP35914 BTNL10-201ENST00000595971 695 ntBASIC15.15■□□□□ 0.02
HMGCLP35914 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.15■□□□□ 0.02
HMGCLP35914 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.15■□□□□ 0.02
HMGCLP35914 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 AC013726.1-201ENST00000563747 2285 ntBASIC15.15■□□□□ 0.02
HMGCLP35914 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.15■□□□□ 0.02
HMGCLP35914 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.15■□□□□ 0.02
HMGCLP35914 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HMGCLP35914 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCLP35914 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.15■□□□□ 0.02
HMGCLP35914 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGCLP35914 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.14■□□□□ 0.01
HMGCLP35914 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
HMGCLP35914 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HMGCLP35914 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HMGCLP35914 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 FGD5P1-202ENST00000614866 2498 ntBASIC15.14■□□□□ 0.01
HMGCLP35914 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.14■□□□□ 0.01
HMGCLP35914 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.14■□□□□ 0.01
HMGCLP35914 TMEM14DP-201ENST00000422205 345 ntBASIC15.14■□□□□ 0.01
HMGCLP35914 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGCLP35914 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGCLP35914 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.14■□□□□ 0.01
HMGCLP35914 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
HMGCLP35914 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGCLP35914 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
HMGCLP35914 AL022328.1-201ENST00000610050 478 ntBASIC15.14■□□□□ 0.01
HMGCLP35914 AC145423.3-201ENST00000615987 467 ntBASIC15.14■□□□□ 0.01
HMGCLP35914 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.14■□□□□ 0.01
HMGCLP35914 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HMGCLP35914 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 AC023090.2-201ENST00000625182 2110 ntBASIC15.14■□□□□ 0.01
HMGCLP35914 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.14■□□□□ 0.01
HMGCLP35914 AP002414.2-201ENST00000591780 3365 ntBASIC15.14■□□□□ 0.01
HMGCLP35914 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGCLP35914 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HMGCLP35914 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCLP35914 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HMGCLP35914 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HMGCLP35914 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.13■□□□□ 0.01
HMGCLP35914 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGCLP35914 AL138709.1-201ENST00000614840 1693 ntBASIC15.13■□□□□ 0.01
HMGCLP35914 AC067930.6-201ENST00000623257 4947 ntBASIC15.13■□□□□ 0.01
HMGCLP35914 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms