Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 IGHV3-72-202ENST00000621503 303 ntBASIC15.05■□□□□ -0
CDH3P22223 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.05■□□□□ -0
CDH3P22223 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.05■□□□□ -0
CDH3P22223 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.05■□□□□ -0
CDH3P22223 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.05■□□□□ -0
CDH3P22223 LINC00528-201ENST00000600723 2160 ntBASIC15.05■□□□□ -0
CDH3P22223 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.05■□□□□ -0
CDH3P22223 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CDH3P22223 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.05■□□□□ -0
CDH3P22223 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CDH3P22223 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.04■□□□□ -0
CDH3P22223 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH3P22223 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH3P22223 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH3P22223 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH3P22223 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH3P22223 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH3P22223 AL359183.1-201ENST00000623796 2132 ntBASIC15.04■□□□□ -0
CDH3P22223 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CDH3P22223 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.04■□□□□ -0
CDH3P22223 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH3P22223 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CDH3P22223 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH3P22223 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH3P22223 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.04■□□□□ -0
CDH3P22223 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH3P22223 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.04■□□□□ -0
CDH3P22223 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH3P22223 AC134915.1-201ENST00000426461 574 ntBASIC15.04■□□□□ -0
CDH3P22223 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.04■□□□□ -0
CDH3P22223 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.04■□□□□ -0
CDH3P22223 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.04■□□□□ -0
CDH3P22223 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.04■□□□□ -0
CDH3P22223 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.04■□□□□ -0
CDH3P22223 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.04■□□□□ -0
CDH3P22223 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.04■□□□□ -0
CDH3P22223 BRI3BPP1-201ENST00000594224 787 ntBASIC15.04■□□□□ -0
CDH3P22223 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
CDH3P22223 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH3P22223 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH3P22223 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.04■□□□□ -0
CDH3P22223 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH3P22223 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CDH3P22223 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.04■□□□□ -0
CDH3P22223 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH3P22223 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CDH3P22223 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.04■□□□□ -0
CDH3P22223 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH3P22223 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.04■□□□□ -0
CDH3P22223 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CDH3P22223 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.03■□□□□ -0
CDH3P22223 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
CDH3P22223 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.03■□□□□ -0
CDH3P22223 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDH3P22223 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
CDH3P22223 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.03■□□□□ -0
CDH3P22223 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.03■□□□□ -0
CDH3P22223 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.03■□□□□ -0
CDH3P22223 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CDH3P22223 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.03■□□□□ -0
CDH3P22223 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDH3P22223 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.03■□□□□ -0
CDH3P22223 AL162726.2-201ENST00000438986 1017 ntBASIC15.03■□□□□ -0
CDH3P22223 TTTY23B-201ENST00000442790 549 ntBASIC15.03■□□□□ -0
CDH3P22223 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
CDH3P22223 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.03■□□□□ -0
CDH3P22223 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.03■□□□□ -0
CDH3P22223 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.03■□□□□ -0
CDH3P22223 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.03■□□□□ -0
CDH3P22223 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDH3P22223 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.03■□□□□ -0
CDH3P22223 AC000095.1-201ENST00000603208 874 ntBASIC15.03■□□□□ -0
CDH3P22223 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.03■□□□□ -0
CDH3P22223 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.03■□□□□ -0
CDH3P22223 INTS4P2-202ENST00000614726 2019 ntBASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms