Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL2P13500 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CCL2P13500 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 TNRC18P2-201ENST00000417666 2714 ntBASIC13.33□□□□□ -0.28
CCL2P13500 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
CCL2P13500 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL2P13500 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL2P13500 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL2P13500 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCL2P13500 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL2P13500 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CCL2P13500 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL2P13500 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 AL158070.2-201ENST00000623713 1621 ntBASIC13.32□□□□□ -0.28
CCL2P13500 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 AC007686.3-201ENST00000619017 3487 ntBASIC13.32□□□□□ -0.28
CCL2P13500 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL2P13500 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
CCL2P13500 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL2P13500 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL2P13500 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL2P13500 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 GHSR-202ENST00000427970 912 ntBASIC13.32□□□□□ -0.28
CCL2P13500 INE1-201ENST00000456273 945 ntBASIC13.32□□□□□ -0.28
CCL2P13500 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL2P13500 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL2P13500 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL2P13500 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.32□□□□□ -0.28
CCL2P13500 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL2P13500 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
CCL2P13500 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL2P13500 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL2P13500 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
CCL2P13500 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCL2P13500 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.32□□□□□ -0.28
CCL2P13500 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL2P13500 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
CCL2P13500 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CCL2P13500 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CCL2P13500 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CCL2P13500 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL2P13500 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL2P13500 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCL2P13500 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CCL2P13500 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCL2P13500 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CCL2P13500 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CCL2P13500 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL2P13500 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCL2P13500 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms