Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.93■□□□□ 0.46
TOP1P11387 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.93■□□□□ 0.46
TOP1P11387 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TOP1P11387 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TOP1P11387 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOP1P11387 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOP1P11387 AC006486.2-201ENST00000624246 2199 ntBASIC17.93■□□□□ 0.46
TOP1P11387 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOP1P11387 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOP1P11387 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.93■□□□□ 0.46
TOP1P11387 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP1P11387 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.92■□□□□ 0.46
TOP1P11387 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP1P11387 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TOP1P11387 AC148477.4-201ENST00000613430 1793 ntBASIC17.92■□□□□ 0.46
TOP1P11387 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP1P11387 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.92■□□□□ 0.46
TOP1P11387 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP1P11387 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.92■□□□□ 0.46
TOP1P11387 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TOP1P11387 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TOP1P11387 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
TOP1P11387 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP1P11387 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP1P11387 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TOP1P11387 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.92■□□□□ 0.46
TOP1P11387 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TOP1P11387 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.92■□□□□ 0.46
TOP1P11387 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TOP1P11387 AC104989.1-201ENST00000519711 778 ntBASIC17.92■□□□□ 0.46
TOP1P11387 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.92■□□□□ 0.46
TOP1P11387 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.92■□□□□ 0.46
TOP1P11387 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.92■□□□□ 0.46
TOP1P11387 AP005482.1-201ENST00000563722 1273 ntBASIC17.92■□□□□ 0.46
TOP1P11387 AC145423.3-201ENST00000615987 467 ntBASIC17.92■□□□□ 0.46
TOP1P11387 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TOP1P11387 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TOP1P11387 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TOP1P11387 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP1P11387 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP1P11387 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP1P11387 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TOP1P11387 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP1P11387 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.92■□□□□ 0.46
TOP1P11387 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TOP1P11387 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TOP1P11387 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.91■□□□□ 0.46
TOP1P11387 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.91■□□□□ 0.46
TOP1P11387 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TOP1P11387 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.91■□□□□ 0.46
TOP1P11387 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.91■□□□□ 0.46
TOP1P11387 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TOP1P11387 KLF2P4-201ENST00000451959 1225 ntBASIC17.91■□□□□ 0.46
TOP1P11387 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 CTBP2P5-201ENST00000454986 1264 ntBASIC17.91■□□□□ 0.46
TOP1P11387 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.91■□□□□ 0.46
TOP1P11387 AC025279.2-201ENST00000569730 653 ntBASIC17.91■□□□□ 0.46
TOP1P11387 MIR4259-201ENST00000584466 101 ntBASIC17.91■□□□□ 0.46
TOP1P11387 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.91■□□□□ 0.46
TOP1P11387 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.91■□□□□ 0.46
TOP1P11387 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.91■□□□□ 0.46
TOP1P11387 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.91■□□□□ 0.46
TOP1P11387 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.91■□□□□ 0.46
TOP1P11387 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.91■□□□□ 0.46
TOP1P11387 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TOP1P11387 AC112693.3-201ENST00000624819 1983 ntBASIC17.91■□□□□ 0.46
TOP1P11387 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
TOP1P11387 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TOP1P11387 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
TOP1P11387 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TOP1P11387 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.91■□□□□ 0.46
TOP1P11387 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP1P11387 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TOP1P11387 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.9■□□□□ 0.46
TOP1P11387 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.9■□□□□ 0.46
TOP1P11387 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TOP1P11387 AL138709.1-201ENST00000614840 1693 ntBASIC17.9■□□□□ 0.46
TOP1P11387 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TOP1P11387 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TOP1P11387 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms