Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALM3P0DP25 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALM3P0DP25 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.68■□□□□ 0.42
CALM3P0DP25 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALM3P0DP25 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALM3P0DP25 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALM3P0DP25 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALM3P0DP25 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALM3P0DP25 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CALM3P0DP25 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CALM3P0DP25 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.68■□□□□ 0.42
CALM3P0DP25 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALM3P0DP25 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 AC018665.1-201ENST00000622927 1362 ntBASIC17.67■□□□□ 0.42
CALM3P0DP25 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CALM3P0DP25 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CALM3P0DP25 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.67■□□□□ 0.42
CALM3P0DP25 TSPY26P-202ENST00000565928 3884 ntBASIC17.67■□□□□ 0.42
CALM3P0DP25 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.67■□□□□ 0.42
CALM3P0DP25 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.67■□□□□ 0.42
CALM3P0DP25 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.67■□□□□ 0.42
CALM3P0DP25 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.67■□□□□ 0.42
CALM3P0DP25 BCRP2-202ENST00000447763 634 ntBASIC17.67■□□□□ 0.42
CALM3P0DP25 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.67■□□□□ 0.42
CALM3P0DP25 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.67■□□□□ 0.42
CALM3P0DP25 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CALM3P0DP25 BCRP6-201ENST00000510112 632 ntBASIC17.67■□□□□ 0.42
CALM3P0DP25 BCRP7-201ENST00000511549 544 ntBASIC17.67■□□□□ 0.42
CALM3P0DP25 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.67■□□□□ 0.42
CALM3P0DP25 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.67■□□□□ 0.42
CALM3P0DP25 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.67■□□□□ 0.42
CALM3P0DP25 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.67■□□□□ 0.42
CALM3P0DP25 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.67■□□□□ 0.42
CALM3P0DP25 RN7SL48P-201ENST00000579283 293 ntBASIC17.67■□□□□ 0.42
CALM3P0DP25 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.67■□□□□ 0.42
CALM3P0DP25 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.67■□□□□ 0.42
CALM3P0DP25 AC132938.4-201ENST00000623835 848 ntBASIC17.67■□□□□ 0.42
CALM3P0DP25 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.67■□□□□ 0.42
CALM3P0DP25 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 LINC00528-201ENST00000600723 2160 ntBASIC17.67■□□□□ 0.42
CALM3P0DP25 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CALM3P0DP25 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CALM3P0DP25 AL138709.1-201ENST00000614840 1693 ntBASIC17.67■□□□□ 0.42
CALM3P0DP25 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CALM3P0DP25 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.67■□□□□ 0.42
CALM3P0DP25 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CALM3P0DP25 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALM3P0DP25 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALM3P0DP25 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CALM3P0DP25 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.66■□□□□ 0.42
CALM3P0DP25 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CALM3P0DP25 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.66■□□□□ 0.42
CALM3P0DP25 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.66■□□□□ 0.42
CALM3P0DP25 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALM3P0DP25 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALM3P0DP25 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.66■□□□□ 0.42
CALM3P0DP25 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CALM3P0DP25 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CALM3P0DP25 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.66■□□□□ 0.42
CALM3P0DP25 C2orf27AP3-201ENST00000434123 579 ntBASIC17.66■□□□□ 0.42
CALM3P0DP25 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CALM3P0DP25 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.66■□□□□ 0.42
CALM3P0DP25 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CALM3P0DP25 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.66■□□□□ 0.42
CALM3P0DP25 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.66■□□□□ 0.42
CALM3P0DP25 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CALM3P0DP25 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CALM3P0DP25 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.66■□□□□ 0.42
CALM3P0DP25 AC025279.2-201ENST00000569730 653 ntBASIC17.66■□□□□ 0.42
CALM3P0DP25 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.66■□□□□ 0.42
CALM3P0DP25 GNRHR2-203ENST00000581100 1187 ntBASIC17.66■□□□□ 0.42
CALM3P0DP25 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALM3P0DP25 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.66■□□□□ 0.42
CALM3P0DP25 AL354718.3-201ENST00000616414 581 ntBASIC17.66■□□□□ 0.42
CALM3P0DP25 CR382287.1-201ENST00000623954 586 ntBASIC17.66■□□□□ 0.42
CALM3P0DP25 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALM3P0DP25 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CALM3P0DP25 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CALM3P0DP25 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
CALM3P0DP25 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALM3P0DP25 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CALM3P0DP25 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.66■□□□□ 0.42
CALM3P0DP25 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALM3P0DP25 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALM3P0DP25 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms