Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.45□□□□□ -0.26
UBCP0CG48 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
UBCP0CG48 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
UBCP0CG48 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.45□□□□□ -0.26
UBCP0CG48 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
UBCP0CG48 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.45□□□□□ -0.26
UBCP0CG48 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.45□□□□□ -0.26
UBCP0CG48 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
UBCP0CG48 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
UBCP0CG48 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
UBCP0CG48 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.45□□□□□ -0.26
UBCP0CG48 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.45□□□□□ -0.26
UBCP0CG48 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.45□□□□□ -0.26
UBCP0CG48 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.45□□□□□ -0.26
UBCP0CG48 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.45□□□□□ -0.26
UBCP0CG48 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
UBCP0CG48 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
UBCP0CG48 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.45□□□□□ -0.26
UBCP0CG48 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.45□□□□□ -0.26
UBCP0CG48 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.45□□□□□ -0.26
UBCP0CG48 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
UBCP0CG48 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
UBCP0CG48 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.45□□□□□ -0.26
UBCP0CG48 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.45□□□□□ -0.26
UBCP0CG48 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.45□□□□□ -0.26
UBCP0CG48 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
UBCP0CG48 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 AC006504.5-208ENST00000588784 2401 ntBASIC13.44□□□□□ -0.26
UBCP0CG48 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.44□□□□□ -0.26
UBCP0CG48 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
UBCP0CG48 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
UBCP0CG48 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.44□□□□□ -0.26
UBCP0CG48 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
UBCP0CG48 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
UBCP0CG48 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
UBCP0CG48 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.44□□□□□ -0.26
UBCP0CG48 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
UBCP0CG48 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.44□□□□□ -0.26
UBCP0CG48 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.44□□□□□ -0.26
UBCP0CG48 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
UBCP0CG48 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
UBCP0CG48 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.44□□□□□ -0.26
UBCP0CG48 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.44□□□□□ -0.26
UBCP0CG48 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.44□□□□□ -0.26
UBCP0CG48 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.44□□□□□ -0.26
UBCP0CG48 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.44□□□□□ -0.26
UBCP0CG48 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
UBCP0CG48 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.44□□□□□ -0.26
UBCP0CG48 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
UBCP0CG48 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.44□□□□□ -0.26
UBCP0CG48 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.44□□□□□ -0.26
UBCP0CG48 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.44□□□□□ -0.26
UBCP0CG48 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
UBCP0CG48 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.44□□□□□ -0.26
UBCP0CG48 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.44□□□□□ -0.26
UBCP0CG48 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.44□□□□□ -0.26
UBCP0CG48 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.44□□□□□ -0.26
UBCP0CG48 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBCP0CG48 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms