Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL5A2P05997 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.53■□□□□ 0.72
COL5A2P05997 LINC02199-201ENST00000506655 2702 ntBASIC19.53■□□□□ 0.72
COL5A2P05997 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL5A2P05997 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.53■□□□□ 0.72
COL5A2P05997 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC19.53■□□□□ 0.72
COL5A2P05997 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.53■□□□□ 0.72
COL5A2P05997 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL5A2P05997 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL5A2P05997 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC19.53■□□□□ 0.72
COL5A2P05997 AL512306.1-201ENST00000432698 848 ntBASIC19.53■□□□□ 0.72
COL5A2P05997 AL354861.1-201ENST00000445213 355 ntBASIC19.53■□□□□ 0.72
COL5A2P05997 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC19.53■□□□□ 0.72
COL5A2P05997 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC19.53■□□□□ 0.72
COL5A2P05997 CR383656.3-201ENST00000551315 183 ntBASIC19.53■□□□□ 0.72
COL5A2P05997 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC19.53■□□□□ 0.72
COL5A2P05997 AC138466.4-201ENST00000623965 852 ntBASIC19.53■□□□□ 0.72
COL5A2P05997 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COL5A2P05997 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC19.53■□□□□ 0.72
COL5A2P05997 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL5A2P05997 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL5A2P05997 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL5A2P05997 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.52■□□□□ 0.72
COL5A2P05997 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL5A2P05997 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL5A2P05997 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC19.52■□□□□ 0.72
COL5A2P05997 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL5A2P05997 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL5A2P05997 STRN-202ENST00000379213 2254 ntTSL 5 BASIC19.52■□□□□ 0.72
COL5A2P05997 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL5A2P05997 PSMD4P1-201ENST00000433951 1109 ntBASIC19.52■□□□□ 0.72
COL5A2P05997 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC19.52■□□□□ 0.72
COL5A2P05997 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC19.52■□□□□ 0.72
COL5A2P05997 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC19.52■□□□□ 0.72
COL5A2P05997 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC19.52■□□□□ 0.72
COL5A2P05997 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC19.52■□□□□ 0.72
COL5A2P05997 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL5A2P05997 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL5A2P05997 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL5A2P05997 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL5A2P05997 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.52■□□□□ 0.71
COL5A2P05997 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.52■□□□□ 0.71
COL5A2P05997 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL5A2P05997 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC19.52■□□□□ 0.71
COL5A2P05997 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.52■□□□□ 0.71
COL5A2P05997 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC19.52■□□□□ 0.71
COL5A2P05997 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.52■□□□□ 0.71
COL5A2P05997 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL5A2P05997 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
COL5A2P05997 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.52■□□□□ 0.71
COL5A2P05997 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL5A2P05997 AC092850.2-201ENST00000623821 2697 ntBASIC19.51■□□□□ 0.71
COL5A2P05997 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL5A2P05997 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COL5A2P05997 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.51■□□□□ 0.71
COL5A2P05997 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
COL5A2P05997 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL5A2P05997 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL5A2P05997 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL5A2P05997 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
COL5A2P05997 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC19.51■□□□□ 0.71
COL5A2P05997 AC092638.2-201ENST00000441105 947 ntBASIC19.51■□□□□ 0.71
COL5A2P05997 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COL5A2P05997 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC19.51■□□□□ 0.71
COL5A2P05997 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC19.51■□□□□ 0.71
COL5A2P05997 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL5A2P05997 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC19.51■□□□□ 0.71
COL5A2P05997 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL5A2P05997 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
COL5A2P05997 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.51■□□□□ 0.71
COL5A2P05997 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL5A2P05997 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL5A2P05997 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.51■□□□□ 0.71
COL5A2P05997 AP005117.1-202ENST00000581724 1908 ntBASIC19.51■□□□□ 0.71
COL5A2P05997 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
COL5A2P05997 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
COL5A2P05997 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
COL5A2P05997 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
COL5A2P05997 HLA-DMA-203ENST00000395305 777 ntBASIC19.5■□□□□ 0.71
COL5A2P05997 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC19.5■□□□□ 0.71
COL5A2P05997 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 RHEB-207ENST00000496004 744 ntTSL 2 BASIC19.5■□□□□ 0.71
COL5A2P05997 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 ALG1L13P-202ENST00000519320 584 ntBASIC19.5■□□□□ 0.71
COL5A2P05997 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC19.5■□□□□ 0.71
COL5A2P05997 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
COL5A2P05997 RN7SL470P-201ENST00000583069 259 ntBASIC19.5■□□□□ 0.71
COL5A2P05997 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC19.5■□□□□ 0.71
COL5A2P05997 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC19.5■□□□□ 0.71
COL5A2P05997 LINC00431-202ENST00000636375 159 ntBASIC19.5■□□□□ 0.71
COL5A2P05997 MVK-217ENST00000639206 367 ntTSL 5 BASIC19.5■□□□□ 0.71
COL5A2P05997 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms