Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 C1QBPP1-201ENST00000400117 770 ntBASIC14.36□□□□□ -0.11
PRAMEF2O60811 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 AC004066.1-201ENST00000502488 802 ntBASIC14.36□□□□□ -0.11
PRAMEF2O60811 GAPDHP40-201ENST00000505218 1006 ntBASIC14.36□□□□□ -0.11
PRAMEF2O60811 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 PTP4A1P2-201ENST00000546033 454 ntBASIC14.36□□□□□ -0.11
PRAMEF2O60811 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 AC120045.2-201ENST00000567334 178 ntBASIC14.36□□□□□ -0.11
PRAMEF2O60811 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 AC124283.3-201ENST00000570869 594 ntBASIC14.36□□□□□ -0.11
PRAMEF2O60811 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 AL022328.1-201ENST00000610050 478 ntBASIC14.36□□□□□ -0.11
PRAMEF2O60811 MIR6775-201ENST00000617557 69 ntBASIC14.36□□□□□ -0.11
PRAMEF2O60811 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.36□□□□□ -0.11
PRAMEF2O60811 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF2O60811 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PRAMEF2O60811 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF2O60811 WASH3P-207ENST00000560956 1394 ntBASIC14.35□□□□□ -0.11
PRAMEF2O60811 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF2O60811 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF2O60811 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF2O60811 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF2O60811 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 AC104457.1-201ENST00000401024 814 ntBASIC14.35□□□□□ -0.11
PRAMEF2O60811 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF2O60811 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF2O60811 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF2O60811 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 SNX29P1-201ENST00000548357 1007 ntBASIC14.35□□□□□ -0.11
PRAMEF2O60811 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 SAMD11P1-201ENST00000571429 661 ntBASIC14.35□□□□□ -0.11
PRAMEF2O60811 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 MIR4259-201ENST00000584466 101 ntBASIC14.35□□□□□ -0.11
PRAMEF2O60811 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF2O60811 AC093813.1-201ENST00000605066 256 ntBASIC14.35□□□□□ -0.11
PRAMEF2O60811 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PRAMEF2O60811 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF2O60811 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF2O60811 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF2O60811 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF2O60811 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms