Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 AC138028.6-201ENST00000616106 1482 ntBASIC15.15■□□□□ 0.02
PCDHGA12O60330 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 AC063926.3-201ENST00000624734 5658 ntBASIC15.15■□□□□ 0.02
PCDHGA12O60330 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 AKR7A2P1-201ENST00000460134 915 ntBASIC15.15■□□□□ 0.02
PCDHGA12O60330 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 AC091804.1-201ENST00000486888 567 ntBASIC15.15■□□□□ 0.02
PCDHGA12O60330 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.15■□□□□ 0.02
PCDHGA12O60330 EEF1DP1-201ENST00000585891 896 ntBASIC15.15■□□□□ 0.02
PCDHGA12O60330 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.15■□□□□ 0.02
PCDHGA12O60330 AC005695.3-201ENST00000614522 232 ntBASIC15.15■□□□□ 0.02
PCDHGA12O60330 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA12O60330 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA12O60330 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 AC068587.6-202ENST00000641839 5619 ntBASIC15.14■□□□□ 0.01
PCDHGA12O60330 AC015818.8-201ENST00000587907 1519 ntBASIC15.14■□□□□ 0.01
PCDHGA12O60330 AC011477.6-201ENST00000604980 1927 ntBASIC15.14■□□□□ 0.01
PCDHGA12O60330 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 ELK2AP-201ENST00000392510 1007 ntBASIC15.14■□□□□ 0.01
PCDHGA12O60330 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 MTX1P1-201ENST00000440904 838 ntBASIC15.14■□□□□ 0.01
PCDHGA12O60330 HOMER2P2-201ENST00000451621 847 ntBASIC15.14■□□□□ 0.01
PCDHGA12O60330 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms